Co-expression analysis

Gene ID PtpAffx.223043.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g32970: subtilase family protein (HF=2e-4)
Module size 6 genes
NF 0.17
%ile 32.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6791.10.90PtpAffx.223043.1.S1_atpmrna40832--2e-4At1g32970subtilase family proteinO.I.H.G.S.X.
0.5078.60.90PtpAffx.211107.1.S1_x_atpmrna21820hypothetical protein-2e+0At2g31620receptor-like protein kinase-relatedO.I.H.G.S.X.
0.3357.50.91PtpAffx.5285.1.A1_s_atCV254744hypothetical protein-1e+0At1g55670PSAG (PHOTOSYSTEM I SUBUNIT G)O.I.H.G.S.X.
0.3357.50.91Ptp.457.2.S1_atCK089199hypothetical protein-8e-1At3g59360UTR6 (UDP-GALACTOSE TRANSPORTER 6)O.I.H.G.S.X.
0.1525.30.91PtpAffx.218039.1.S1_atpmrna33551hypothetical protein-1e-8At2g37680-O.I.H.G.S.X.
0.069.80.90PtpAffx.213729.1.S1_atpmrna26794hypothetical protein-5e+0At4g29033-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.998.9GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.195.5GSM372089Clone3200_LPI2_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
4.095.3GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.494.0GSM372095Clone3200_LPI5_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
3.293.5GSM362889Clone1979_LPI5_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.791.8GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.791.8GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.791.8GSM372093Clone3200_LPI5_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.791.8GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.691.3GSM362887Clone1979_LPI5_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1620551_s_at, orthologous to the query gene, PtpAffx.223043.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8795.21620551_s_atAt1g32970hypothetical protein LOC100266698-4e+0At5g23212-O.I.H.G.S.X.
0.7289.71607407_atAt1g32970similar to nitrate reductase-2e-3At1g77760NIA1 (NITRATE REDUCTASE 1)O.I.H.G.S.X.
0.6787.91618742_atAt1g32970hypothetical protein LOC100244789-4e-1At1g18630GR-RBP6 (glycine-rich RNA-binding protein 6)O.I.H.G.S.X.
0.6685.11610934_s_atAt1g32970hypothetical protein LOC100241651-1e-10At3g56290unknown proteinO.I.H.G.S.X.
0.6484.71610036_atAt1g32970hypothetical protein LOC100244789-7e-2At3g62330zinc knuckle (CCHC-type) family proteinO.I.H.G.S.X.
0.6484.71611159_atAt1g32970hypothetical protein LOC100254481-5e-26At3g51895SULTR3O.I.H.G.S.X.
0.6384.31621495_atAt1g32970hypothetical protein LOC100259742-2e-7At3g52720ACA1 (ALPHA CARBONIC ANHYDRASE 1)O.I.H.G.S.X.
0.6183.21608908_atAt1g32970hypothetical protein LOC100256431-3e-27At1g64680unknown proteinO.I.H.G.S.X.
0.5980.61617790_atAt1g32970hypothetical protein LOC100262138-2e-3At4g00050UNE10 (unfertilized embryo sac 10)O.I.H.G.S.X.
0.5679.41615141_atAt1g32970hypothetical protein LOC100247840-2e+0At3g01970WRKY45O.I.H.G.S.X.
0.5375.21612562_atAt1g32970hypothetical protein LOC100264675-4e-31At5g67370unknown proteinO.I.H.G.S.X.
0.5375.21610871_s_atAt1g32970hypothetical protein LOC100244516-0At4g35090CAT2 (CATALASE 2)O.I.H.G.S.X.
0.5072.71610691_atAt1g32970hypothetical protein LOC100250451-1e-6At5g55570unknown proteinO.I.H.G.S.X.
0.5072.71619418_atAt1g32970hypothetical protein LOC100262138-2e+1At4g30410transcription factorO.I.H.G.S.X.
0.4969.31607585_atAt1g32970hypothetical protein LOC100267799-7e+0At5g09820plastid-lipid associated protein PAP / fibrillin family proteinO.I.H.G.S.X.
0.4666.51619127_atAt1g32970hypothetical protein LOC100264365-2e+0At4g02075PIT1 (pitchoun 1)O.I.H.G.S.X.
0.4158.71618989_atAt1g32970hypothetical protein LOC100258700-1e+0At1g67785unknown proteinO.I.H.G.S.X.
0.4158.71615128_atAt1g32970hypothetical protein LOC100253412-1e+0At3g45093-O.I.H.G.S.X.
0.4057.71608268_atAt1g32970hypothetical protein LOC100264331-4e+0At2g01350QPT (QUINOLINATE PHOSHORIBOSYLTRANSFERASE)O.I.H.G.S.X.
0.3853.61621055_a_atAt1g32970hypothetical LOC100263712-5e-1At2g04039unknown proteinO.I.H.G.S.X.
0.3751.71607548_atAt1g32970hypothetical protein LOC100260378-2e-33At2g24270ALDH11A3O.I.H.G.S.X.
0.3446.81614183_atAt1g32970hypothetical protein LOC100268021-6e-33At4g29590methyltransferaseO.I.H.G.S.X.
0.3141.31614061_atAt1g32970hypothetical protein LOC100264676-2e-14At1g25440zinc finger (B-box type) family proteinO.I.H.G.S.X.
0.2937.71609903_atAt1g32970hypothetical protein LOC100256148-4e+0At5g02200FHL (FAR-RED-ELONGATED HYPOCOTYL1-LIKE)O.I.H.G.S.X.
0.2327.51607155_atAt1g32970hypothetical protein LOC100266884-2e-6At1g50020unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Zea_mays



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