Co-expression analysis

Gene ID PtpAffx.223043.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g32970: subtilase family protein (HF=2e-4)
Module size 6 genes
NF 0.17
%ile 32.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6791.10.90PtpAffx.223043.1.S1_atpmrna40832--2e-4At1g32970subtilase family proteinO.I.H.G.S.X.
0.5078.60.90PtpAffx.211107.1.S1_x_atpmrna21820hypothetical protein-2e+0At2g31620receptor-like protein kinase-relatedO.I.H.G.S.X.
0.3357.50.91PtpAffx.5285.1.A1_s_atCV254744hypothetical protein-1e+0At1g55670PSAG (PHOTOSYSTEM I SUBUNIT G)O.I.H.G.S.X.
0.3357.50.91Ptp.457.2.S1_atCK089199hypothetical protein-8e-1At3g59360UTR6 (UDP-GALACTOSE TRANSPORTER 6)O.I.H.G.S.X.
0.1525.30.91PtpAffx.218039.1.S1_atpmrna33551hypothetical protein-1e-8At2g37680-O.I.H.G.S.X.
0.069.80.90PtpAffx.213729.1.S1_atpmrna26794hypothetical protein-5e+0At4g29033-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.998.9GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.195.5GSM372089Clone3200_LPI2_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
4.095.3GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.494.0GSM372095Clone3200_LPI5_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
3.293.5GSM362889Clone1979_LPI5_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.791.8GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.791.8GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.791.8GSM372093Clone3200_LPI5_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.791.8GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.691.3GSM362887Clone1979_LPI5_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO

Inter-species module comparison

A co-expression module including the barley gene, rbags22o03_at, orthologous to the query gene, PtpAffx.223043.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9699.4rbags22o03_atAt1g32970--1e+0At4g38850SAUR15 (SMALL AUXIN UPREGULATED 15)O.I.H.G.S.X.
0.4863.2Contig9641_atAt1g32970--1e-1At3g49300proline-rich family proteinO.I.H.G.S.X.
0.4559.3Contig12383_atAt1g32970--6e-1At5g10870ATCM2 (chorismate mutase 2)O.I.H.G.S.X.
0.3545.1Contig25359_atAt1g32970--8e-1At5g39540-O.I.H.G.S.X.
0.3443.6HVSMEl0002L04r2_s_atAt1g32970--2e+1At5g23027unknown proteinO.I.H.G.S.X.
0.3342.6Contig4011_atAt1g32970--1e-5At1g14520MIOX1 (MYO-INISITOL OXYGENASE)O.I.H.G.S.X.
0.3037.0Contig14654_atAt1g32970--7e-1At3g50550unknown proteinO.I.H.G.S.X.
0.3037.0Contig11759_atAt1g32970--1e-5At3g12160RABA4D (RAB GTPASE HOMOLOG A4D)O.I.H.G.S.X.
0.3037.0Contig10886_atAt1g32970--9e-1At1g01550BPS1 (BYPASS 1)O.I.H.G.S.X.
0.2935.5Contig19794_atAt1g32970--3e-1At2g45530zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.2835.5Contig11507_atAt1g32970--7e-22At5g19420Ran GTPase binding / chromatin binding / zinc ion bindingO.I.H.G.S.X.
0.2630.4HVSMEa0007D19r2_atAt1g32970--1e+1At4g32717SCRL24 (SCR-Like 24)O.I.H.G.S.X.
0.2224.2Contig3212_s_atAt1g32970--4e-3At5g13700ATPAO1 (ARABIDOPSIS THALIANA POLYAMINE OXIDASE 1)O.I.H.G.S.X.
0.2122.6Contig1735_s_atAt1g32970--1e+0At3g22400LOX5O.I.H.G.S.X.
0.2021.1Contig11330_atAt1g32970--2e-15At3g03940protein kinase family proteinO.I.H.G.S.X.
0.1919.6Contig9106_atAt1g32970--2e+0At3g22160VQ motif-containing proteinO.I.H.G.S.X.
0.1919.6Contig1613_atAt1g32970--3e-1At1g43970unknown proteinO.I.H.G.S.X.
0.1818.2Contig11585_atAt1g32970--6e+0At5g02580unknown proteinO.I.H.G.S.X.
0.1514.1HZ64L16r_atAt1g32970--5e-1At2g28405LCR32 (Low-molecular-weight cysteine-rich 32)O.I.H.G.S.X.
0.1412.9Contig3400_atAt1g32970--1e-28At3g54560HTA11O.I.H.G.S.X.
0.1412.9Contig7615_s_atAt1g32970--8e-1At4g33520PAA1 (P-TYPE ATP-ASE 1)O.I.H.G.S.X.
0.1412.9HA12K13u_s_atAt1g32970--2e-19At1g52740HTA9 (HISTONE H2A PROTEIN 9)O.I.H.G.S.X.
0.032.6HA15P14r_s_atAt1g32970--9e-7At1g18080ATARCAO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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