Co-expression analysis

Gene ID PtpAffx.223043.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g32970: subtilase family protein (HF=2e-4)
Module size 6 genes
NF 0.17
%ile 32.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6791.10.90PtpAffx.223043.1.S1_atpmrna40832--2e-4At1g32970subtilase family proteinO.I.H.G.S.X.
0.5078.60.90PtpAffx.211107.1.S1_x_atpmrna21820hypothetical protein-2e+0At2g31620receptor-like protein kinase-relatedO.I.H.G.S.X.
0.3357.50.91PtpAffx.5285.1.A1_s_atCV254744hypothetical protein-1e+0At1g55670PSAG (PHOTOSYSTEM I SUBUNIT G)O.I.H.G.S.X.
0.3357.50.91Ptp.457.2.S1_atCK089199hypothetical protein-8e-1At3g59360UTR6 (UDP-GALACTOSE TRANSPORTER 6)O.I.H.G.S.X.
0.1525.30.91PtpAffx.218039.1.S1_atpmrna33551hypothetical protein-1e-8At2g37680-O.I.H.G.S.X.
0.069.80.90PtpAffx.213729.1.S1_atpmrna26794hypothetical protein-5e+0At4g29033-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.998.9GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.195.5GSM372089Clone3200_LPI2_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
4.095.3GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.494.0GSM372095Clone3200_LPI5_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
3.293.5GSM362889Clone1979_LPI5_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.791.8GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.791.8GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.791.8GSM372093Clone3200_LPI5_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.791.8GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.691.3GSM362887Clone1979_LPI5_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO

Inter-species module comparison

A co-expression module including the Arabidopsis gene, At1g32970, orthologous to the query gene, PtpAffx.223043.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.O.I.H.G.S.X.Other DB
0.7184.2At1g32970840191subtilase family proteinF:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOAFMO.I.H.G.S.X.
0.7385.5At3g63060825481EDL3 (EID1-like 3)F:unknown;P:unknown;C:unknown;PO.I.H.G.S.X.
0.6781.6At2g26380817178disease resistance protein-related / LRR protein-relatedF:protein binding;P:signal transduction, defense response;C:endomembrane system;PMOBFAVO.I.H.G.S.X.
0.5773.8At1g70130843349lectin protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAO.I.H.G.S.X.
0.5773.8At3g60120825182BGLU27 (BETA GLUCOSIDASE 27)F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cellular_component unknown;BOPMFAO.I.H.G.S.X.
0.5773.8At5g52400835316CYP715A1member of CYP715AO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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