Co-expression analysis

Gene ID	PtpAffx.222184.1.S1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At4g27680: MSP1 protein, putative / intramitochondrial sorting protein, putative (HF=3e-3)
Module size	9 genes
NF	0.26
%ile	46.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.53	80.5	0.86	PtpAffx.222184.1.S1_at	pmrna39436	hypothetical protein	-	3e-3	At4g27680	MSP1 protein, putative / intramitochondrial sorting protein, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.35	59.7	0.87	PtpAffx.210708.1.S1_s_at	pmrna21002	hypothetical protein	-	1e-1	At2g04570	GDSL-motif lipase/hydrolase family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.32	55.2	0.88	PtpAffx.225735.1.S1_at	pmrna45304	hypothetical protein	-	3e+0	At4g20780	calcium-binding protein, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.27	47.1	0.88	PtpAffx.212310.1.S1_at	pmrna24137	hypothetical protein	-	1e+0	At3g04220	disease resistance protein (TIR-NBS-LRR class), putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.26	45.2	0.87	PtpAffx.134238.1.A1_a_at	CV242930	hypothetical protein	-	5e-5	At2g47350	PAPA-1-like family protein / zinc finger (HIT type) family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.21	36.5	0.87	PtpAffx.220275.1.S1_at	pmrna36644	hypothetical protein	-	3e-1	At4g37409	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.20	34.6	0.88	PtpAffx.202362.1.S1_at	pmrna4740	hypothetical protein	-	5e-3	At3g09760	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.19	32.7	0.87	PtpAffx.216393.1.S1_at	pmrna31148	hypothetical protein	-	1e-23	At3g52050	5'-3' exonuclease family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.17	29.1	0.86	Ptp.5583.2.S1_at	CV245022	hypothetical protein	-	9e-24	At2g01250	60S ribosomal protein L7 (RPL7B)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
10.4	99.0	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
5.2	96.8	GSM327660	Populus balsamifera_Male_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
4.3	95.8	GSM327657	Populus balsamifera_Female_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
4.2	95.6	GSM327659	Populus balsamifera_Male_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
3.5	94.3	GSM327656	Populus balsamifera_Female_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
3.3	93.7	GSM327658	Populus balsamifera_Female_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
3.0	92.9	GSM372096	Clone3200_LPI5_N-_4w_rep2	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.9	92.5	GSM372095	Clone3200_LPI5_N-_4w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.4	90.4	GSM327406	Populus balsamifera_1006_young_leaf_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.2	89.3	GSM327380	Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_1	GSE13990	Populus balsamifera developmental tissue series

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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