Co-expression analysis

Gene ID	PtpAffx.221369.1.S1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At5g07600: oleosin / glycine-rich protein (HF=1e+1)
Module size	6 genes
NF	0.01
%ile	2.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.2	0.77	PtpAffx.221369.1.S1_at	pmrna38229	hypothetical protein	-	1e+1	At5g07600	oleosin / glycine-rich protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.01	2.2	0.93	Ptp.1153.1.A1_at	CV243531	hypothetical protein	-	1e-4	At1g79870	oxidoreductase family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.01	2.2	0.88	PtpAffx.14282.1.S1_at	DN490949	-	-	4e-24	At5g22300	NIT4 (NITRILASE 4)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.01	2.2	0.85	PtpAffx.224510.1.S1_at	pmrna43115	cytochrome P450	-	4e-34	At2g40890	CYP98A3 (cytochrome P450, family 98, subfamily A, polypeptide 3)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.01	2.2	0.90	PtpAffx.155435.1.A1_at	CV236820	-	-	3e-48	At1g29150	ATS9 (ARABIDOPSIS NON-ATPASE SUBUNIT 9)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
-	0.4	0.90	Ptp.2314.1.S1_s_at	DN495644	-	-	7e-39	Atcg00140	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.1	97.6	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
4.5	96.1	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
4.4	95.9	GSM327660	Populus balsamifera_Male_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
4.4	95.9	GSM328533	Populus x canescens root hypoxia_rep_03	GSE13109	Effect of hypoxia on gene expression in Grey poplar
3.5	94.3	GSM327657	Populus balsamifera_Female_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.6	91.3	GSM327656	Populus balsamifera_Female_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.5	90.9	GSM327413	Populus balsamifera_1006_differentiating_xylem_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.5	90.9	GSM328077	Populus x canescens leaf control_rep_06	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.4	90.4	GSM328484	Populus x canescens root hypoxia_rep_01	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.3	89.8	GSM328562	Populus x canescens root hypoxia_rep_04	GSE13109	Effect of hypoxia on gene expression in Grey poplar

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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