Co-expression analysis

Gene ID PtpAffx.221305.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At4g25570: ACYB-2 (HF=4e+0)
Module size 7 genes
NF 0.10
%ile 21.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6086.00.77PtpAffx.221305.1.S1_atpmrna38092hypothetical protein-4e+0At4g25570ACYB-2O.I.H.G.S.X.
0.2747.10.74PtpAffx.214207.1.S1_atpmrna27647hypothetical protein-9e-1At5g11590TINY2 (TINY2)O.I.H.G.S.X.
0.1830.80.74PtpAffx.202174.1.S1_atpmrna4345hypothetical protein-2e+0At3g57000nucleolar essential protein-relatedO.I.H.G.S.X.
0.1525.30.73PtpAffx.205245.1.S1_atpmrna10394--5e-3At1g24260SEP3 (SEPALLATA3)O.I.H.G.S.X.
0.1423.50.73PtpAffx.222952.1.S1_atpmrna40688hypothetical protein-8e+0At1g58460unknown proteinO.I.H.G.S.X.
0.069.80.73PtpAffx.209813.1.S1_x_atpmrna19353hypothetical protein-1e-2At1g29200unknown proteinO.I.H.G.S.X.
0.046.90.74PtpAffx.219846.1.S1_atpmrna35995hypothetical protein-2e+1At4g21970unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.497.0GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.395.8GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.295.6GSM334225Populus balsamifera_1006_mature_leaf_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.095.3GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.894.9GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.494.0GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.193.2GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.992.5GSM362885Clone1979_LPI2_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.892.1GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.791.8GSM334224Populus balsamifera_1006_mature_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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