Co-expression analysis

Gene ID PtpAffx.221191.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At4g02630: protein kinase family protein (HF=2e-41)
Module size 8 genes
NF 0.03
%ile 6.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9399.50.91PtpAffx.221191.1.S1_atpmrna37880hypothetical protein-2e-41At4g02630protein kinase family proteinO.I.H.G.S.X.
0.1729.10.92Ptp.4615.1.S1_atCN523657hypothetical protein-2e-21At1g53730SRF6 (STRUBBELIG-RECEPTOR FAMILY 6)O.I.H.G.S.X.
0.1219.60.94PtpAffx.18830.1.S1_atCV239939--8e-3At4g31340myosin heavy chain-relatedO.I.H.G.S.X.
0.1118.10.91PtpAffx.211264.1.S1_atpmrna22102--7e-8At1g33420PHD finger family proteinO.I.H.G.S.X.
0.058.30.93PtpAffx.201717.1.S1_atpmrna3411hypothetical protein-5e-32At3g63270unknown proteinO.I.H.G.S.X.
0.035.20.93Ptp.2437.1.S1_atCV226303hypothetical protein-7e-9At1g13380unknown proteinO.I.H.G.S.X.
0.023.60.91PtpAffx.10616.1.S1_atBP936015hypothetical protein-1e-63At2g42910ribose-phosphate pyrophosphokinase 4 / phosphoribosyl diphosphate synthetase 4 (PRS4)O.I.H.G.S.X.
0.012.20.91PtpAffx.17099.1.A1_atCV244560hypothetical protein-1e-23At1g69220SIK1O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.698.3GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
5.697.2GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.996.5GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.095.3GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.494.0GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.892.1GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.892.1GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.791.8GSM328292Populus x canescens root control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.188.6GSM328277Populus x canescens root control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.684.5GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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