Co-expression analysis

Gene ID PtpAffx.220848.1.S1_x_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At5g04120: phosphoglycerate/bisphosphoglycerate mutase family protein (HF=2e+0)
Module size 7 genes
NF 0.23
%ile 42.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5683.90.88PtpAffx.220848.1.S1_x_atpmrna37298hypothetical protein-2e+0At5g04120phosphoglycerate/bisphosphoglycerate mutase family proteinO.I.H.G.S.X.
0.3458.30.89Ptp.5850.2.A1_atCV253282--1e-22At4g1810060S ribosomal protein L32 (RPL32A)O.I.H.G.S.X.
0.3255.20.88PtpAffx.130551.1.S1_atDN501005hypothetical protein-2e-8At1g67830ATFXG1 (alpha-fucosidase 1)O.I.H.G.S.X.
0.2441.80.91PtpAffx.5132.2.A1_atCV260456hypothetical protein-1e-7At1g22200unknown proteinO.I.H.G.S.X.
0.1525.30.89PtpAffx.202825.1.S1_atpmrna5597--4e-1At5g16850ATTERT (TELOMERASE REVERSE TRANSCRIPTASE)O.I.H.G.S.X.
0.1321.60.88PtpAffx.25334.2.S1_atCV262387hypothetical protein-1e+1At5g44574unknown proteinO.I.H.G.S.X.
0.1321.60.90PtpAffx.207353.1.S1_s_atpmrna14591hypothetical protein-3e-50At5g49555amine oxidase-relatedO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.497.7GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
5.597.1GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphereLink to GEO
5.096.6GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.293.5GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.892.1GSM327405Populus balsamifera_1006_young_leaf_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.490.4GSM327406Populus balsamifera_1006_young_leaf_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.490.4GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM372089Clone3200_LPI2_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.289.3GSM334225Populus balsamifera_1006_mature_leaf_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM362885Clone1979_LPI2_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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