Co-expression analysis

Gene ID PtpAffx.220781.1.S1_at
Gene name cytochrome P450
Homology with ArabidopsisSimilar to At2g19850: - (HF=2e+0)
Module size 7 genes
NF 0.48
%ile 77.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5380.50.89PtpAffx.220781.1.S1_atpmrna37212cytochrome P450-2e+0At2g19850-O.I.H.G.S.X.
0.5078.60.90PtpAffx.29085.1.A1_s_atDN489411--4e+0At1g75700HVA22G (HVA22-LIKE PROTEIN G)O.I.H.G.S.X.
0.5078.60.92PtpAffx.42652.1.S1_atCV268229histone H3-1e-1At1g01370HTR12O.I.H.G.S.X.
0.4875.40.89PtpAffx.201290.1.S1_atpmrna2561hypothetical protein-7e-16At5g55820unknown proteinO.I.H.G.S.X.
0.4673.70.90PtpAffx.101690.1.A1_atCV255238--9e-1At5g41401unknown proteinO.I.H.G.S.X.
0.4369.70.90PtpAffx.225505.1.S1_atpmrna44896hypothetical protein-5e-35At2g36400AtGRF3 (GROWTH-REGULATING FACTOR 3)O.I.H.G.S.X.
0.2950.50.90PtpAffx.87978.1.S1_s_atCX170242leucine-rich repeat protein kinase-1e-38At5g62230ERL1 (ERECTA-LIKE 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.897.4GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.696.2GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.596.1GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.295.6GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.794.7GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.590.9GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.188.6GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.088.0GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.684.5GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.684.5GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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