| Gene ID | PtpAffx.219791.1.S1_at |
| Gene name | hypothetical protein |
| Homology with Arabidopsis | Similar to At3g53150: UGT73D1 (UDP-glucosyl transferase 73D1) (HF=3e-3) |
| Module size | 6 genes |
| NF | 0.53 |
| %ile | 83.6 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.63 | 88.1 | 0.89 | PtpAffx.219791.1.S1_at | pmrna35884 | hypothetical protein | - | 3e-3 | At3g53150 | UGT73D1 (UDP-glucosyl transferase 73D1) | O.I. | H.G. | S.X. | |
| 0.67 | 91.1 | 0.94 | Ptp.7236.1.S1_s_at | CV255575 | hypothetical protein | - | 9e-2 | At3g51790 | ATG1 (ARABIDOPSIS TRANSMEMBRANE PROTEIN G1P-RELATED 1) | O.I. | H.G. | S.X. | |
| 0.57 | 84.2 | 0.90 | PtpAffx.93557.1.A1_at | BP932995 | hypothetical protein | - | 4e+0 | At5g41860 | unknown protein | O.I. | H.G. | S.X. | |
| 0.36 | 61.6 | 0.93 | PtpAffx.225666.1.S1_at | pmrna45178 | hypothetical protein | - | 1e-5 | At3g51330 | aspartyl protease family protein | O.I. | H.G. | S.X. | |
| 0.33 | 57.5 | 0.93 | PtpAffx.151889.1.A1_at | BP932620 | hypothetical protein | - | 1e+0 | At5g37670 | 15.7 kDa class I-related small heat shock protein-like (HSP15.7-CI) | O.I. | H.G. | S.X. | |
| 0.31 | 53.7 | 0.93 | PtpAffx.29282.1.A1_a_at | BP934395 | hypothetical protein | - | 2e-13 | At5g27450 | MK (MEVALONATE KINASE) | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 3.8 | 94.9 | GSM136938 | Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucrose | GSE5887 | Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere | |
| 3.1 | 93.2 | GSM327409 | Populus balsamifera_1006_root_midday_3 | GSE13990 | Populus balsamifera developmental tissue series | |
| 2.8 | 92.1 | GSM244441 | Mixed infected tissue, biological rep3 | GSE9673 | Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi | |
| 2.2 | 89.3 | GSM328483 | Populus x canescens root control_rep_06 | GSE13109 | Effect of hypoxia on gene expression in Grey poplar | |
| 2.1 | 88.6 | GSM328281 | Populus x canescens root control_rep_02 | GSE13109 | Effect of hypoxia on gene expression in Grey poplar | |
| 2.1 | 88.6 | GSM328560 | Populus x canescens root control_rep_11 | GSE13109 | Effect of hypoxia on gene expression in Grey poplar | |
| 1.7 | 85.5 | GSM328561 | Populus x canescens root control_rep_12 | GSE13109 | Effect of hypoxia on gene expression in Grey poplar | |
| 1.7 | 85.5 | GSM136936 | Poplar in 1 x hrp + 0.25 % sucrose no bacteria | GSE5887 | Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere | |
| 1.6 | 84.5 | GSM328534 | Populus x canescens root control_rep_07 | GSE13109 | Effect of hypoxia on gene expression in Grey poplar | |
| 1.6 | 84.5 | GSM327397 | Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_2 | GSE13990 | Populus balsamifera developmental tissue series | |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Oryza_sativa |
| Triticum_aestivum |
| Vitis_vinifera |
| Zea_mays |
Back to the CoP portal site
Back to the KAGIANA project homepage