Co-expression analysis

Gene ID PtpAffx.219768.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At3g09830: protein kinase, putative (HF=1e-42)
Module size 6 genes
NF 0.40
%ile 68.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7393.60.95PtpAffx.219768.1.S1_atpmrna35829hypothetical protein-1e-42At3g09830protein kinase, putativeO.I.H.G.S.X.
0.5078.60.95PtpAffx.207471.1.S1_atpmrna14830hypothetical protein-2e-4At5g09210DNA binding / transcription factorO.I.H.G.S.X.
0.4471.90.94PtpAffx.5266.1.A1_atCV255338--1e+1At5g63780SHA1 (shoot apical meristem arrest 1)O.I.H.G.S.X.
0.3153.70.94PtpAffx.18276.1.A1_a_atCV254703hypothetical protein-2e-59At3g15260protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.2340.50.95PtpAffx.208002.1.S1_x_atpmrna15881hypothetical protein-2e-59At1g25540PFT1 (PHYTOCHROME AND FLOWERING TIME 1)O.I.H.G.S.X.
0.2238.30.94PtpAffx.25342.3.S1_s_atCK091631hypothetical protein-3e-29At5g20990B73O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.897.4GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.794.7GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.594.3GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.691.3GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.691.3GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.289.3GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.987.2GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.987.2GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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