Co-expression analysis

Gene ID PtpAffx.219686.1.S1_at
Gene name cytochrome P450
Homology with ArabidopsisSimilar to At3g14650: CYP72A11 (HF=1e+0)
Module size 6 genes
NF 0.35
%ile 60.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.3661.60.90PtpAffx.219686.1.S1_atpmrna35660cytochrome P450-1e+0At3g14650CYP72A11O.I.H.G.S.X.
0.4268.60.90PtpAffx.28818.1.S1_atBU812529--4e+0At4g14305-O.I.H.G.S.X.
0.3863.70.89PtpAffx.212939.1.S1_atpmrna25319hypothetical protein-2e-8At5g07380unknown proteinO.I.H.G.S.X.
0.3153.70.90PtpAffx.222656.1.S1_atpmrna40203hypothetical protein-4e-2At1g33340epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-relatedO.I.H.G.S.X.
0.2950.50.90PtpAffx.203936.1.S1_atpmrna7766hypothetical protein-7e-1At3g06740zinc finger (GATA type) family proteinO.I.H.G.S.X.
0.2136.50.90PtpAffx.209579.1.S1_atpmrna18958hypothetical protein-2e-1At3g52150RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.295.6GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.892.1GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM327281Populus balsamifera_20071015_Seedling_continuous_light_6d_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.088.0GSM372095Clone3200_LPI5_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
1.987.2GSM328066Populus x canescens leaf control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.987.2GSM372090Clone3200_LPI2_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
1.785.5GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.785.5GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.785.5GSM328274Populus x canescens leaf hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.684.5GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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