Co-expression analysis

Gene ID	PtpAffx.219633.1.S1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At1g44085: glycine-rich protein (HF=5e+0)
Module size	7 genes
NF	0.07
%ile	14.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.86	97.4	0.76	PtpAffx.219633.1.S1_at	pmrna35595	hypothetical protein	-	5e+0	At1g44085	glycine-rich protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.22	38.3	0.76	PtpAffx.215470.1.S1_at	pmrna29685	hypothetical protein	-	2e+0	At5g26790	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.14	23.5	0.79	PtpAffx.12073.1.A1_at	CV241637	hypothetical protein	-	4e+0	At3g62840	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.13	21.6	0.77	PtpAffx.1324.1.A1_at	CV231199	-	-	9e-2	At5g19760	dicarboxylate/tricarboxylate carrier (DTC)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.04	6.9	0.76	PtpAffx.215495.1.S1_at	pmrna29723	hypothetical protein	-	3e+0	At3g10580	myb family transcription factor	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.03	5.2	0.76	PtpAffx.210805.1.S1_at	pmrna21215	hypothetical protein	-	2e+0	At4g25490	CBF1 (C-REPEAT/DRE BINDING FACTOR 1)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.02	3.6	0.76	PtpAffx.205367.1.S1_at	pmrna10627	hypothetical protein	-	3e-1	At5g43175	basic helix-loop-helix (bHLH) family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.0	98.4	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
5.6	97.2	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
3.8	94.9	GSM328483	Populus x canescens root control_rep_06	GSE13109	Effect of hypoxia on gene expression in Grey poplar
3.5	94.3	GSM328281	Populus x canescens root control_rep_02	GSE13109	Effect of hypoxia on gene expression in Grey poplar
3.3	93.7	GSM327658	Populus balsamifera_Female_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.9	92.5	GSM327657	Populus balsamifera_Female_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.6	91.3	GSM328557	Populus x canescens root control_rep_08	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.4	90.4	GSM372096	Clone3200_LPI5_N-_4w_rep2	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.2	89.3	GSM327659	Populus balsamifera_Male_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.2	89.3	GSM327412	Populus balsamifera_1006_differentiating_xylem_midday_2	GSE13990	Populus balsamifera developmental tissue series

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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