Co-expression analysis

Gene ID	PtpAffx.219142.1.S1_at
Gene name	cytochrome P450
Homology with Arabidopsis	Similar to At2g37780: DC1 domain-containing protein (HF=7e-1)
Module size	6 genes
NF	0.07
%ile	14.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	78.6	0.80	PtpAffx.219142.1.S1_at	pmrna34976	cytochrome P450	-	7e-1	At2g37780	DC1 domain-containing protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.17	29.1	0.82	PtpAffx.202158.1.S1_at	pmrna4313	hypothetical protein	-	1e-1	At2g15270	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.09	14.6	0.81	PtpAffx.217536.1.S1_at	pmrna32841	hypothetical protein	-	2e-25	At1g05610	APS2 (ADP-glucose pyrophoshorylase small subunit 2)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.04	6.9	0.81	PtpAffx.215866.1.S1_at	pmrna30300	hypothetical protein	-	4e-3	At1g59740	proton-dependent oligopeptide transport (POT) family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.04	6.9	0.81	PtpAffx.218661.1.S1_at	pmrna34358	hypothetical protein	-	1e+0	At2g42940	DNA-binding family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.04	6.9	0.83	PtpAffx.222184.1.S1_at	pmrna39436	hypothetical protein	-	3e-3	At4g27680	MSP1 protein, putative / intramitochondrial sorting protein, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.2	96.8	GSM327397	Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_2	GSE13990	Populus balsamifera developmental tissue series
4.5	96.1	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
3.8	94.9	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.9	92.5	GSM328483	Populus x canescens root control_rep_06	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.6	91.3	GSM327408	Populus balsamifera_1006_root_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.5	90.9	GSM328558	Populus x canescens root control_rep_09	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.5	90.9	GSM372095	Clone3200_LPI5_N-_4w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.3	89.8	GSM362888	Clone1979_LPI5_N+_4w_rep2	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.3	89.8	GSM372097	Clone3200_LPI5_N-_8w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.2	89.3	GSM327398	Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_3	GSE13990	Populus balsamifera developmental tissue series

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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