Co-expression analysis

Gene ID PtpAffx.218924.1.S1_at
Gene name autoinhibited calcium ATPase
Homology with ArabidopsisSimilar to At2g41560: ACA4 (AUTO-INHIBITED CA(2+)-ATPASE, ISOFORM 4) (HF=1e-28)
Module size 6 genes
NF 0.62
%ile 91.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6086.01.00PtpAffx.218924.1.S1_atpmrna34683autoinhibited calcium ATPase-1e-28At2g41560ACA4 (AUTO-INHIBITED CA(2+)-ATPASE, ISOFORM 4)O.I.H.G.S.X.
0.7393.61.00PtpAffx.204028.1.S1_atpmrna7945hypothetical protein-6e-60At1g65960GAD2 (GLUTAMATE DECARBOXYLASE 2)O.I.H.G.S.X.
0.6791.11.00PtpAffx.206298.1.S1_atpmrna12485hypothetical protein-2e-17At3g54100unknown proteinO.I.H.G.S.X.
0.6086.01.00PtpAffx.200244.1.S1_atpmrna472hypothetical protein-3e-13At5g13150ATEXO70C1 (exocyst subunit EXO70 family protein C1)O.I.H.G.S.X.
0.5683.91.00PtpAffx.204952.1.S1_atpmrna9797hypothetical protein-6e-13At3g46750unknown proteinO.I.H.G.S.X.
0.4673.71.00PtpAffx.202223.1.S1_atpmrna4451hypothetical protein-1e-30At4g00350MATE efflux family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.697.9GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.996.5GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.894.9GSM328559Populus x canescens root control_rep_10GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.694.5GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.892.1GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.791.8GSM328277Populus x canescens root control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.791.8GSM334224Populus balsamifera_1006_mature_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.590.9GSM372091Clone3200_LPI2_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.490.4GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM372095Clone3200_LPI5_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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