Co-expression analysis

Gene ID PtpAffx.218505.1.S1_x_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At1g05680: UDP-glucoronosyl/UDP-glucosyl transferase family protein (HF=1e-6)
Module size 8 genes
NF 0.12
%ile 23.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7192.60.83PtpAffx.218505.1.S1_x_atpmrna34153hypothetical protein-1e-6At1g05680UDP-glucoronosyl/UDP-glucosyl transferase family proteinO.I.H.G.S.X.
0.3153.70.85PtpAffx.80954.1.S1_atBU865987hypothetical protein-2e-11At5g13210-O.I.H.G.S.X.
0.3052.00.85PtpAffx.143539.1.S1_atCX184307hypothetical protein-6e-1At2g24870self-incompatibility protein-relatedO.I.H.G.S.X.
0.2238.30.88Ptp.973.1.A1_atCK089832hypothetical protein-9e-1At5g47670NF-YB6 (NUCLEAR FACTOR Y, SUBUNIT B6)O.I.H.G.S.X.
0.1118.10.88Ptp.5130.1.S1_s_atBU872575hypothetical protein-1e+0At2g26880AGL41 (AGAMOUS-LIKE 41)O.I.H.G.S.X.
0.069.80.86PtpAffx.205785.1.S1_atpmrna11442hypothetical protein-4e-33At1g27620transferase family proteinO.I.H.G.S.X.
0.069.80.85PtpAffx.202066.1.S1_atpmrna4125hypothetical protein-6e-4At2g26560PLA2A (PHOSPHOLIPASE A 2A)O.I.H.G.S.X.
0.046.90.86PtpAffx.215449.1.S1_atpmrna29652hypothetical protein-4e-1At4g03620myosin heavy chain-relatedO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.797.3GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphereLink to GEO
3.995.1GSM327405Populus balsamifera_1006_young_leaf_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.594.3GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.193.2GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.892.1GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.590.9GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM327281Populus balsamifera_20071015_Seedling_continuous_light_6d_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.188.6GSM327406Populus balsamifera_1006_young_leaf_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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