Co-expression analysis

Gene ID PtpAffx.218039.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At2g37680: - (HF=1e-8)
Module size 6 genes
NF 0.36
%ile 61.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.3964.60.91PtpAffx.218039.1.S1_atpmrna33551hypothetical protein-1e-8At2g37680-O.I.H.G.S.X.
0.5582.20.90PtpAffx.210704.1.S1_atpmrna20996hypothetical protein-1e+0At5g62740band 7 family proteinO.I.H.G.S.X.
0.3357.50.91PtpAffx.5285.1.A1_s_atCV254744hypothetical protein-1e+0At1g55670PSAG (PHOTOSYSTEM I SUBUNIT G)O.I.H.G.S.X.
0.3357.50.91Ptp.457.2.S1_atCK089199hypothetical protein-8e-1At3g59360UTR6 (UDP-GALACTOSE TRANSPORTER 6)O.I.H.G.S.X.
0.3357.50.91PtpAffx.108016.1.A1_atCK091896--4e-1At2g43745-O.I.H.G.S.X.
0.1729.10.92PtpAffx.205407.1.S1_atpmrna10705hypothetical protein-2e+0At3g24068-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.598.3GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
7.098.0GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.794.7GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.691.3GSM362885Clone1979_LPI2_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.691.3GSM362887Clone1979_LPI5_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.590.9GSM372095Clone3200_LPI5_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.490.4GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM362886Clone1979_LPI2_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.289.3GSM372093Clone3200_LPI5_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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