Co-expression analysis

Gene ID PtpAffx.217704.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to Atcg01280: - (HF=3e-86)
Module size 6 genes
NF 0.12
%ile 23.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7794.90.81PtpAffx.217704.1.S1_atpmrna33068hypothetical protein-3e-86Atcg01280-O.I.H.G.S.X.
0.3357.50.81PtpAffx.211622.1.S1_atpmrna22777--9e-6At1g35580CINV1 (cytosolic invertase 1)O.I.H.G.S.X.
0.1729.10.81PtpAffx.208921.1.S1_atpmrna17689hypothetical protein-7e-2At3g06390integral membrane family proteinO.I.H.G.S.X.
0.0711.60.82PtpAffx.210627.1.S1_atpmrna20845GRAS family transcription factor-3e+0At5g40382cytochrome-c oxidaseO.I.H.G.S.X.
0.069.80.82PtpAffx.205338.1.S1_atpmrna10569hypothetical protein-9e-1At1g71190SAG18 (SENESCENCE ASSOCIATED GENE 18)O.I.H.G.S.X.
0.058.30.81PtpAffx.23380.2.S1_atCX654371--2e+0At3g52220unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.298.8GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
5.497.0GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.596.1GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.293.5GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.092.9GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.590.9GSM362885Clone1979_LPI2_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.590.9GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.590.9GSM372093Clone3200_LPI5_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
1.987.2GSM372092Clone3200_LPI2_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
1.886.4GSM362888Clone1979_LPI5_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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