Co-expression analysis

Gene ID	PtpAffx.217166.1.S1_x_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At5g47130: Bax inhibitor-1 family / BI-1 family (HF=9e-1)
Module size	6 genes
NF	0.09
%ile	17.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.53	80.5	0.77	PtpAffx.217166.1.S1_x_at	pmrna32318	hypothetical protein	-	9e-1	At5g47130	Bax inhibitor-1 family / BI-1 family	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.44	71.9	0.78	PtpAffx.216462.1.S1_at	pmrna31245	-	-	1e+0	At5g54150	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.36	61.6	0.79	PtpAffx.211117.1.S1_at	pmrna21838	hypothetical protein	-	1e+0	At1g47540	trypsin inhibitor, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.15	25.3	0.77	PtpAffx.205537.1.S1_at	pmrna10955	hypothetical protein	-	2e-16	At1g77510	ATPDIL1-2 (PDI-LIKE 1-2)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.07	11.6	0.79	PtpAffx.224018.1.S1_at	pmrna42250	hypothetical protein	-	7e-1	At5g59000	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.02	3.6	0.77	PtpAffx.208834.1.S1_at	pmrna17515	hypothetical protein	-	4e+0	At3g58330	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.8	98.7	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
4.7	96.3	GSM327656	Populus balsamifera_Female_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
4.5	96.1	GSM334225	Populus balsamifera_1006_mature_leaf_midday_2	GSE13990	Populus balsamifera developmental tissue series
3.7	94.7	GSM327659	Populus balsamifera_Male_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
3.2	93.5	GSM327660	Populus balsamifera_Male_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.9	92.5	GSM327380	Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_1	GSE13990	Populus balsamifera developmental tissue series
2.6	91.3	GSM327398	Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_3	GSE13990	Populus balsamifera developmental tissue series
2.6	91.3	GSM327397	Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_2	GSE13990	Populus balsamifera developmental tissue series
2.5	90.9	GSM362888	Clone1979_LPI5_N+_4w_rep2	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.3	89.8	GSM372089	Clone3200_LPI2_N+_4w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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