Co-expression analysis

Gene ID PtpAffx.216720.1.S1_s_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At1g76690: OPR2 (HF=1e-14)
Module size 6 genes
NF 0.85
%ile 99.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.20.96PtpAffx.216720.1.S1_s_atpmrna31684hypothetical protein-1e-14At1g76690OPR2O.I.H.G.S.X.
0.9199.20.96PtpAffx.208369.1.S1_atpmrna16643hypothetical protein-3e-15At1g76680OPR1O.I.H.G.S.X.
0.8096.00.96PtpAffx.63940.1.S1_s_atCV273881hypothetical protein-2e+0At4g30450glycine-rich proteinO.I.H.G.S.X.
0.7794.90.97PtpAffx.224631.1.S1_s_atpmrna43355hypothetical protein-2e-11At3g09270ATGSTU8 (GLUTATHIONE S-TRANSFERASE TAU 8)O.I.H.G.S.X.
0.7192.60.96PtpAffx.5004.1.S1_atCV265959--4e-1At3g57910D111/G-patch domain-containing proteinO.I.H.G.S.X.
0.6187.00.96Ptp.3810.1.S1_atCV253278hypothetical protein-4e-17At1g78780pathogenesis-related family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.297.6GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.696.2GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.095.3GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.494.0GSM244433Mlp infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungiLink to GEO
3.494.0GSM244439Mixed infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungiLink to GEO
3.494.0GSM328066Populus x canescens leaf control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.193.2GSM244441Mixed infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungiLink to GEO
3.193.2GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.691.3GSM244440Mixed infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungiLink to GEO
2.490.4GSM244436Mmd infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungiLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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