Co-expression analysis

Gene ID PtpAffx.216713.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At3g45290: MLO3 (MILDEW RESISTANCE LOCUS O 3) (HF=7e-7)
Module size 6 genes
NF 0.67
%ile 94.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7192.60.95PtpAffx.216713.1.S1_atpmrna31668hypothetical protein-7e-7At3g45290MLO3 (MILDEW RESISTANCE LOCUS O 3)O.I.H.G.S.X.
0.6187.00.94PtpAffx.223809.1.S1_s_atpmrna42009hypothetical protein-3e+0At5g45370nodulin-related / integral membrane family proteinO.I.H.G.S.X.
0.6187.00.94PtpAffx.213725.1.S1_atpmrna26782cytochrome P450 probable campestanol to 6-deoxocathasterone or 6-oxocampestanol to cathasterone-8e+0At4g24972TPD1 (TAPETUM DETERMINANT 1)O.I.H.G.S.X.
0.6086.00.96PtpAffx.223306.1.S1_s_atpmrna41231hypothetical protein-2e+0At2g09388unknown proteinO.I.H.G.S.X.
0.5582.20.94PtpAffx.74112.1.A1_atBP930450hypothetical protein-8e-5At1g32350AOX1D (alternative oxidase 1D)O.I.H.G.S.X.
0.5582.20.95PtpAffx.74004.1.A1_atDN487047hypothetical protein-9e-1At1g29951CPuORF35 (Conserved peptide upstream open reading frame 35)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.196.8GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.295.6GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphereLink to GEO
3.995.1GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.393.7GSM327358Populus balsamifera_20071015_Seedling_continuous_light_6d_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.193.2GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.092.9GSM327281Populus balsamifera_20071015_Seedling_continuous_light_6d_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.791.8GSM327359Populus balsamifera_20071015_Seedling_continuous_light_6d_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.691.3GSM327406Populus balsamifera_1006_young_leaf_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.590.9GSM328292Populus x canescens root control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.389.8GSM327405Populus balsamifera_1006_young_leaf_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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