Co-expression analysis

Gene ID	PtpAffx.216698.1.S1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At4g21860: MSRB2 (methionine sulfoxide reductase B 2) (HF=4e+0)
Module size	7 genes
NF	0.42
%ile	70.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	91.1	0.83	PtpAffx.216698.1.S1_at	pmrna31647	hypothetical protein	-	4e+0	At4g21860	MSRB2 (methionine sulfoxide reductase B 2)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.55	82.2	0.82	PtpAffx.63433.1.A1_at	CV241080	-	-	5e+0	At4g19095	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.40	67.0	0.85	PtpAffx.93272.1.A1_at	DN491919	hypothetical protein	-	9e-1	At1g80200	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.33	57.5	0.85	PtpAffx.204543.1.S1_at	pmrna8919	hypothetical protein	-	3e-2	At5g06200	integral membrane family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.29	50.5	0.85	PtpAffx.217042.1.S1_at	pmrna32161	hypothetical protein	-	2e-1	At2g29500	17.6 kDa class I small heat shock protein (HSP17.6B-CI)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.29	50.5	0.85	PtpAffx.211544.1.S1_at	pmrna22624	hypothetical protein	-	5e-1	At3g61390	U-box domain-containing protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.23	40.5	0.85	PtpAffx.204020.1.S1_at	pmrna7930	hypothetical protein	-	2e-1	At5g01080	beta-galactosidase	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.8	97.4	GSM327659	Populus balsamifera_Male_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
5.8	97.4	GSM327658	Populus balsamifera_Female_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
5.6	97.2	GSM327657	Populus balsamifera_Female_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
4.7	96.3	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
3.2	93.5	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.9	92.5	GSM327660	Populus balsamifera_Male_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.8	92.1	GSM372043	Clone1979_LPI5_N-_8w_rep2	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.8	92.1	GSM372042	Clone1979_LPI5_N-_8w_rep1	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.8	92.1	GSM327656	Populus balsamifera_Female_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.5	90.9	GSM244430	non infected tissue, biological rep1	GSE9673	Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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