Co-expression analysis

Gene ID	PtpAffx.216399.1.S1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At2g42380: bZIP transcription factor family protein (HF=2e-40)
Module size	6 genes
NF	0.02
%ile	4.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	94.9	0.81	PtpAffx.216399.1.S1_at	pmrna31157	hypothetical protein	-	2e-40	At2g42380	bZIP transcription factor family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.36	61.6	0.81	PtpAffx.222061.1.S1_at	pmrna39266	hypothetical protein	-	6e+0	At5g15660	F-box family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.25	43.6	0.82	PtpAffx.211098.1.S1_at	pmrna21801	hypothetical protein	-	4e-2	At4g10920	KELP	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.09	14.6	0.83	PtpAffx.1682.2.A1_at	CV263377	hypothetical protein	-	1e+0	At2g42940	DNA-binding family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.01	2.2	0.85	Ptp.6841.1.S1_at	CN549636	hypothetical protein	-	1e-87	At1g08200	AXS2 (UDP-D-APIOSE/UDP-D-XYLOSE SYNTHASE 2)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.01	2.2	0.84	PtpAffx.77708.1.A1_at	CK097133	-	-	2e+0	At5g22430	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
9.3	98.8	GSM327656	Populus balsamifera_Female_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
5.6	97.2	GSM327658	Populus balsamifera_Female_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
4.3	95.8	GSM362887	Clone1979_LPI5_N+_4w_rep1	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
3.8	94.9	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
3.5	94.3	GSM327405	Populus balsamifera_1006_young_leaf_midday_2	GSE13990	Populus balsamifera developmental tissue series
3.3	93.7	GSM327657	Populus balsamifera_Female_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
3.1	93.2	GSM327411	Populus balsamifera_1006_differentiating_xylem_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.8	92.1	GSM372095	Clone3200_LPI5_N-_4w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.6	91.3	GSM327659	Populus balsamifera_Male_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.5	90.9	GSM372090	Clone3200_LPI2_N+_4w_rep2	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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