Co-expression analysis

Gene ID PtpAffx.215902.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At1g56590: clathrin adaptor complexes medium subunit family protein (HF=1e-66)
Module size 35 genes
NF 0.20
%ile 37.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.99100.00.92PtpAffx.215902.1.S1_atpmrna30363hypothetical protein-1e-66At1g56590clathrin adaptor complexes medium subunit family proteinO.I.H.G.S.X.
0.3863.70.95PtpAffx.69398.1.A1_atCV258513hypothetical protein-8e-1At5g58280transcriptional factor B3 family proteinO.I.H.G.S.X.
0.3255.20.94PtpAffx.132513.1.S1_atBU813248hypothetical protein-2e-3At2g42070ATNUDX23 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 23)O.I.H.G.S.X.
0.3052.00.95PtpAffx.204372.1.S1_s_atpmrna8591hypothetical protein-1e-42At4g38240CGL1 (COMPLEX GLYCAN LESS 1)O.I.H.G.S.X.
0.3052.00.94PtpAffx.2347.1.S1_atBU892539hypothetical protein-2e-12At1g24050unknown proteinO.I.H.G.S.X.
0.2950.50.93PtpAffx.209279.1.S1_atpmrna18334hypothetical protein-1e-25At5g05660ATNFXL2O.I.H.G.S.X.
0.2850.50.92PtpAffx.125394.1.S1_atDN499605--2e-2At1g63310-O.I.H.G.S.X.
0.2645.20.95PtpAffx.135867.1.A1_atCK097914--1e-4At1g53710hydrolase/ protein serine/threonine phosphataseO.I.H.G.S.X.
0.2543.60.95PtpAffx.132056.1.A1_s_atDN491976DNA methyltransferase-8e-3At5g14620DRM2 (DOMAINS REARRANGED METHYLTRANSFERASE 2)O.I.H.G.S.X.
0.2441.80.96PtpAffx.39208.1.S1_atBP935754hypothetical protein-6e-58At4g24550clathrin adaptor complexes medium subunit family proteinO.I.H.G.S.X.
0.2441.80.94PtpAffx.1688.1.S1_atCV263511hypothetical protein-2e-9At3g26780catalyticO.I.H.G.S.X.
0.2441.80.95Ptp.908.1.S1_atCK089369hypothetical protein-5e+0At5g07100WRKY26O.I.H.G.S.X.
0.2340.50.94PtpAffx.222230.1.S1_atpmrna39506hypothetical protein-6e-19At1g05270TraB family proteinO.I.H.G.S.X.
0.2238.30.93PtpAffx.140123.1.S1_s_atCX186328hypothetical protein-1e-25At2g36360kelch repeat-containing proteinO.I.H.G.S.X.
0.2136.50.93PtpAffx.161733.1.S1_atBI128724hypothetical protein-2e-30At3g53570AFC1 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1)O.I.H.G.S.X.
0.2136.50.95PtpAffx.216904.1.S1_s_atpmrna31967hypothetical protein-2e-116At5g38880unknown proteinO.I.H.G.S.X.
0.2034.60.94PtpAffx.209798.1.S1_atpmrna19329hypothetical protein-3e-4At5g45660unknown proteinO.I.H.G.S.X.
0.2034.60.94PtpAffx.135344.1.S1_atCN518127hypothetical protein-1e-7At4g24840-O.I.H.G.S.X.
0.2034.60.94PtpAffx.201690.1.S1_s_atpmrna3375--8e-109At3g54610GCN5O.I.H.G.S.X.
0.2034.60.94PtpAffx.202894.1.S1_atpmrna5727hypothetical protein-2e-32At1g17440EER4 (ENHANCED ETHYLENE RESPONSE 4)O.I.H.G.S.X.
0.2034.60.95Ptp.681.1.A1_s_atCV259935--2e-9At4g01320ATSTE24O.I.H.G.S.X.
0.1932.70.94PtpAffx.7433.2.A1_atCV257766hypothetical protein-1e-34At3g04460PEX12O.I.H.G.S.X.
0.1932.70.93PtpAffx.206199.1.S1_atpmrna12316hypothetical protein-1e-3At5g20700senescence-associated protein-relatedO.I.H.G.S.X.
0.1729.10.96PtpAffx.204884.1.S1_x_atpmrna9650hypothetical protein-1e-38At1g51450SPla/RYanodine receptor (SPRY) domain-containing proteinO.I.H.G.S.X.
0.1626.90.96Ptp.7631.1.S1_atBU886141--1e-10At1g47570zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.1626.90.94PtpAffx.2700.1.A1_atCV251058hypothetical protein-1e-6At5g57860ubiquitin family proteinO.I.H.G.S.X.
0.1321.60.94Ptp.4028.1.S1_atDN488604hypothetical protein-3e-45At5g09680cytochrome b5 domain-containing proteinO.I.H.G.S.X.
0.1321.60.96PtpAffx.219764.1.S1_atpmrna35822hypothetical protein-3e-6At2g37035unknown proteinO.I.H.G.S.X.
0.1219.60.96Ptp.7847.1.S1_s_atCN523919hypothetical protein-4e-7At3g22680unknown proteinO.I.H.G.S.X.
0.1118.10.96PtpAffx.202359.1.S1_atpmrna4737hypothetical protein-6e-5At1g10240FRS11 (FAR1-related sequence 11)O.I.H.G.S.X.
0.1118.10.94PtpAffx.203424.1.S1_atpmrna6825hypothetical protein-1e-32At1g11780oxidoreductase, 2OG-Fe(II) oxygenase family proteinO.I.H.G.S.X.
0.1118.10.96PtpAffx.89262.2.S1_a_atCV237169hypothetical protein-1e-13At3g06790plastid developmental protein DAG, putativeO.I.H.G.S.X.
0.0711.60.95Ptp.4677.1.S1_atBU835096hypothetical protein-9e-6At2g42030zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.069.80.95PtpAffx.62134.1.S1_atCX657226hypothetical protein-3e-1At5g14250COP13 (CONSTITUTIVE PHOTOMORPHOGENIC 13)O.I.H.G.S.X.
0.069.80.95PtpAffx.211109.1.S1_atpmrna21825hypothetical protein-3e-21At1g08700presenilin family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.992.5GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.691.3GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.188.6GSM372096Clone3200_LPI5_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.188.6GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.088.0GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.987.2GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.987.2GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.886.4GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.785.5GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.684.5GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphereLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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