Co-expression analysis

Gene ID PtpAffx.215812.1.S1_at
Gene name kip-related cyclin-dependent kinase inhibitor 6
Homology with ArabidopsisSimilar to At4g14810: unknown protein (HF=1e+0)
Module size 6 genes
NF 0.08
%ile 17.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6388.10.81PtpAffx.215812.1.S1_atpmrna30218kip-related cyclin-dependent kinase inhibitor 6-1e+0At4g14810unknown proteinO.I.H.G.S.X.
0.4471.90.81PtpAffx.86862.1.S1_atCK111055--1e+0At5g16550unknown proteinO.I.H.G.S.X.
0.4067.00.84PtpAffx.69006.1.A1_atCV246339--7e-1At4g37500xanthine dehydrogenase family proteinO.I.H.G.S.X.
0.1729.10.81PtpAffx.207832.1.S1_atpmrna15557--9e-9At1g54310RNA bindingO.I.H.G.S.X.
0.035.20.80PtpAffx.210151.1.S1_atpmrna20006hypothetical protein-2e+0At4g27470zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.023.60.81PtpAffx.217179.1.S1_atpmrna32335hypothetical protein-2e+0At1g28490SYP61 (SYNTAXIN OF PLANTS 61)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.997.4GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
5.396.9GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.896.4GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.796.3GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.393.7GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.193.2GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.892.1GSM362886Clone1979_LPI2_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.791.8GSM334226Populus balsamifera_1006_mature_leaf_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.791.8GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.691.3GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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