Co-expression analysis

Gene ID	PtpAffx.214678.1.S1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At5g36960: unknown protein (HF=2e+1)
Module size	6 genes
NF	0.36
%ile	62.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	96.0	0.83	PtpAffx.214678.1.S1_at	pmrna28494	hypothetical protein	-	2e+1	At5g36960	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.60	86.0	0.85	PtpAffx.217617.1.S1_x_at	pmrna32957	hypothetical protein	-	6e-1	At3g46940	deoxyuridine 5'-triphosphate nucleotidohydrolase family	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.44	71.9	0.83	PtpAffx.224940.1.S1_at	pmrna43877	hypothetical protein	-	1e-1	At5g06710	HAT14 (HOMEOBOX FROM ARABIDOPSIS THALIANA)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.34	58.3	0.83	PtpAffx.85847.1.S1_at	CK106428	-	-	4e+0	At4g02910	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.31	53.7	0.83	PtpAffx.119306.1.S1_at	DN484066	-	-	1e-1	At1g47765	F-box family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.17	29.1	0.83	Ptp.7288.1.S1_at	BU895370	hypothetical protein	-	2e-1	At5g62550	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.9	98.4	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
4.5	96.1	GSM327411	Populus balsamifera_1006_differentiating_xylem_midday_1	GSE13990	Populus balsamifera developmental tissue series
3.8	94.9	GSM327281	Populus balsamifera_20071015_Seedling_continuous_light_6d_1	GSE13990	Populus balsamifera developmental tissue series
3.7	94.7	GSM327660	Populus balsamifera_Male_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.9	92.5	GSM327413	Populus balsamifera_1006_differentiating_xylem_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.7	91.8	GSM372096	Clone3200_LPI5_N-_4w_rep2	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.5	90.9	GSM327412	Populus balsamifera_1006_differentiating_xylem_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.5	90.9	GSM362887	Clone1979_LPI5_N+_4w_rep1	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.2	89.3	GSM362888	Clone1979_LPI5_N+_4w_rep2	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.1	88.6	GSM372090	Clone3200_LPI2_N+_4w_rep2	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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