Co-expression analysis

Gene ID PtpAffx.214435.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At2g23890: 5' nucleotidase family protein (HF=2e-4)
Module size 6 genes
NF 0.10
%ile 20.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6791.10.91PtpAffx.214435.1.S1_atpmrna28072hypothetical protein-2e-4At2g238905' nucleotidase family proteinO.I.H.G.S.X.
0.2747.10.92PtpAffx.202812.1.S1_atpmrna5578hypothetical protein-7e-24At5g24750-O.I.H.G.S.X.
0.1830.80.91PtpAffx.86455.1.S1_atAJ853472.1sodium proton exchanger-6e-9At5g55470ATNHX3O.I.H.G.S.X.
0.0812.90.92PtpAffx.223640.1.S1_s_atpmrna41727hypothetical protein-9e-1At5g40850UPM1 (UROPHORPHYRIN METHYLASE 1)O.I.H.G.S.X.
0.046.90.92PtpAffx.122847.1.S1_atBU895628hypothetical protein-4e-11At4g20380zinc finger protein (LSD1)O.I.H.G.S.X.
0.046.90.92PtpAffx.1937.1.S1_a_atCK093997hypothetical protein-2e+0At3g29635transferase family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.898.0GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
5.296.8GSM372092Clone3200_LPI2_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
4.295.6GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.794.7GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.794.7GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.594.3GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.193.2GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.691.3GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.590.9GSM362889Clone1979_LPI5_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.490.4GSM372098Clone3200_LPI5_N-_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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