Co-expression analysis

Gene ID	PtpAffx.214387.1.S1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At4g16510: YbaK/prolyl-tRNA synthetase-related (HF=7e-1)
Module size	7 genes
NF	0.49
%ile	79.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	94.9	0.88	PtpAffx.214387.1.S1_at	pmrna27998	hypothetical protein	-	7e-1	At4g16510	YbaK/prolyl-tRNA synthetase-related	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.57	84.2	0.88	Ptp.3947.1.S1_s_at	CV253657	hypothetical protein	-	4e-1	At5g06870	PGIP2 (POLYGALACTURONASE INHIBITING PROTEIN 2)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.57	84.2	0.92	Ptp.5844.1.S1_s_at	CX169943	hypothetical protein	-	1e-99	At3g46440	UXS5	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.50	78.6	0.92	PtpAffx.1592.1.S1_at	BP926516	hypothetical protein	-	3e-2	At3g55430	glycosyl hydrolase family 17 protein / beta-1,3-glucanase, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.46	73.7	0.86	Ptp.3332.1.S1_at	CV226721	hypothetical protein	-	6e-4	At2g35980	YLS9 (YELLOW-LEAF-SPECIFIC GENE 9)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.38	63.7	0.90	PtpAffx.31375.3.A1_a_at	BP934645	hypothetical protein	-	3e-1	At3g43550	carboxylesterase/ hydrolase, acting on ester bonds / lipase	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.27	47.1	0.88	PtpAffx.26534.1.S1_at	CK095200	hypothetical protein	-	6e-10	At4g39670	glycolipid binding / glycolipid transporter	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.0	98.0	GSM327398	Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_3	GSE13990	Populus balsamifera developmental tissue series
6.3	97.7	GSM327380	Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_1	GSE13990	Populus balsamifera developmental tissue series
4.8	96.4	GSM327657	Populus balsamifera_Female_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
4.4	95.9	GSM327656	Populus balsamifera_Female_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
3.9	95.1	GSM327658	Populus balsamifera_Female_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
3.7	94.7	GSM327660	Populus balsamifera_Male_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
3.6	94.5	GSM328562	Populus x canescens root hypoxia_rep_04	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.7	91.8	GSM328532	Populus x canescens root hypoxia_rep_02	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.5	90.9	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.5	90.9	GSM136938	Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucrose	GSE5887	Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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