Co-expression analysis

Gene ID PtpAffx.214091.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At1g23720: proline-rich extensin-like family protein (HF=1e-3)
Module size 6 genes
NF 0.56
%ile 87.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.20.91PtpAffx.214091.1.S1_atpmrna27435hypothetical protein-1e-3At1g23720proline-rich extensin-like family proteinO.I.H.G.S.X.
0.6791.10.90PtpAffx.201641.1.S1_atpmrna3256hypothetical protein-3e-1At1g09483unknown proteinO.I.H.G.S.X.
0.6187.00.88PtpAffx.160334.1.A1_atCV236700hypothetical protein-1e-1At5g18430GDSL-motif lipase/hydrolase family proteinO.I.H.G.S.X.
0.5582.20.91PtpAffx.221340.1.S1_atpmrna38171hypothetical protein-3e-21At1g71691GDSL-motif lipase/hydrolase family proteinO.I.H.G.S.X.
0.3559.70.90Ptp.4356.1.S1_atCV243203hypothetical protein-4e-43At2g37630AS1 (ASYMMETRIC LEAVES 1)O.I.H.G.S.X.
0.3357.50.91PtpAffx.214245.1.S1_a_atpmrna27715hypothetical protein-8e-9At2g25060plastocyanin-like domain-containing proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.095.3GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.494.0GSM372095Clone3200_LPI5_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.992.5GSM372096Clone3200_LPI5_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.892.1GSM362888Clone1979_LPI5_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.791.8GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM362883Clone1979_LPI2_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
1.987.2GSM372091Clone3200_LPI2_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
1.886.4GSM362889Clone1979_LPI5_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
1.886.4GSM328277Populus x canescens root control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.785.5GSM328284Populus x canescens root control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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