Co-expression analysis

Gene ID PtpAffx.213720.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At3g51610: unknown protein (HF=9e-9)
Module size 6 genes
NF 0.43
%ile 71.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7794.90.92PtpAffx.213720.1.S1_atpmrna26774hypothetical protein-9e-9At3g51610unknown proteinO.I.H.G.S.X.
0.5582.20.93PtpAffx.70456.1.A1_atCK090706hypothetical protein-2e+0At3g58600-O.I.H.G.S.X.
0.5078.60.92PtpAffx.53314.1.A1_atCV229793hypothetical protein-7e-2At1g14450unknown proteinO.I.H.G.S.X.
0.3661.60.93PtpAffx.61388.1.A1_atBP935694hypothetical protein-1e+0At5g02770unknown proteinO.I.H.G.S.X.
0.2950.50.93PtpAffx.87019.1.A1_atBP935009hypothetical protein-9e-14At5g19390pleckstrin homology (PH) domain-containing protein / RhoGAP domain-containing proteinO.I.H.G.S.X.
0.1729.10.92PtpAffx.40711.1.A1_a_atDN496741hypothetical protein-3e-4At1g53040unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.397.7GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
5.597.1GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
5.597.1GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.996.5GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.894.9GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.490.4GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.389.8GSM328563Populus x canescens root hypoxia_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.389.8GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.289.3GSM327400Populus balsamifera_20071015_Etiolated_seedling_6d_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.088.0GSM328559Populus x canescens root control_rep_10GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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