Co-expression analysis

Gene ID PtpAffx.213670.1.S1_s_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At5g01650: macrophage migration inhibitory factor family protein / MIF family protein (HF=9e-27)
Module size 7 genes
NF 0.10
%ile 21.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9299.30.84PtpAffx.213670.1.S1_s_atpmrna26691hypothetical protein-9e-27At5g01650macrophage migration inhibitory factor family protein / MIF family proteinO.I.H.G.S.X.
0.1525.30.95PtpAffx.152284.1.S1_s_atCV236465hypothetical protein-1e-4At1g27390TOM20-2 (TRANSLOCASE OUTER MEMBRANE 20-2)O.I.H.G.S.X.
0.1118.10.93Ptp.6779.1.S1_s_atCV258940hypothetical protein-5e-3At2g28430unknown proteinO.I.H.G.S.X.
0.1118.10.94Ptp.2652.1.A1_s_atCV251557hypothetical protein-2e-9At2g46540unknown proteinO.I.H.G.S.X.
0.0812.90.94Ptp.4346.1.S1_x_atCV272072hypothetical protein-1e-10At3g46430unknown proteinO.I.H.G.S.X.
0.0711.60.95Ptp.2351.1.S1_s_atCF936500hypothetical protein-2e-6At4g30010unknown proteinO.I.H.G.S.X.
0.035.20.91Ptp.287.1.A1_s_atAJ774516hypothetical protein-1e-38At3g15640cytochrome c oxidase family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.398.8GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
7.798.3GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.495.9GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.992.5GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.791.8GSM328284Populus x canescens root control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.490.4GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.289.3GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.188.6GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.188.6GSM328563Populus x canescens root hypoxia_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.088.0GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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