Co-expression analysis

Gene ID PtpAffx.213637.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At3g08970: ATERDJ3A (HF=3e-29)
Module size 6 genes
NF 0.33
%ile 58.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5078.60.91PtpAffx.213637.1.S1_atpmrna26642hypothetical protein-3e-29At3g08970ATERDJ3AO.I.H.G.S.X.
0.4067.00.93PtpAffx.221307.1.S1_atpmrna38100SAUR family protein-3e-1At5g37910seven in absentia (SINA) family proteinO.I.H.G.S.X.
0.4067.00.95PtpAffx.207548.1.S1_atpmrna14981hypothetical protein-2e-2At3g46940deoxyuridine 5'-triphosphate nucleotidohydrolase familyO.I.H.G.S.X.
0.3052.00.92PtpAffx.77708.1.A1_atCK097133--2e+0At5g22430unknown proteinO.I.H.G.S.X.
0.2136.50.94PtpAffx.222764.1.S1_atpmrna40403hypothetical protein-5e-11At2g48050-O.I.H.G.S.X.
0.2136.50.94PtpAffx.219549.1.S1_atpmrna35497hypothetical protein-3e-7At3g52400SYP122 (SYNTAXIN OF PLANTS 122)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.395.8GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.995.1GSM372093Clone3200_LPI5_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
3.995.1GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.494.0GSM362890Clone1979_LPI5_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
3.393.7GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.193.2GSM362889Clone1979_LPI5_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
3.092.9GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.892.1GSM362883Clone1979_LPI2_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.892.1GSM328063Populus x canescens leaf control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.590.9GSM372096Clone3200_LPI5_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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