Co-expression analysis

Gene ID PtpAffx.212911.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At3g48770: ATP binding / DNA binding (HF=4e-26)
Module size 6 genes
NF 0.04
%ile 8.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6388.10.71PtpAffx.212911.1.S1_atpmrna25262hypothetical protein-4e-26At3g48770ATP binding / DNA bindingO.I.H.G.S.X.
0.3052.00.73PtpAffx.220996.1.S1_s_atpmrna37518hypothetical protein-9e-16At5g52170HDG7 (HOMEODOMAIN GLABROUS 7)O.I.H.G.S.X.
0.1219.60.74PtpAffx.223850.1.S1_atpmrna42069hypothetical protein-3e+0At4g03510RMA1O.I.H.G.S.X.
0.046.90.71PtpAffx.219946.1.S1_atpmrna36117hypothetical protein-1e+0At5g46160ribosomal protein L14 family protein / huellenlos paralog (HLP)O.I.H.G.S.X.
0.035.20.72PtpAffx.215470.1.S1_atpmrna29685hypothetical protein-2e+0At5g26790unknown proteinO.I.H.G.S.X.
0.012.20.72PtpAffx.221359.1.S1_s_atpmrna38211hypothetical protein-5e+0At5g16840BPA1 (BINDINGPARTNEROFACD11 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.498.6GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
5.396.9GSM334226Populus balsamifera_1006_mature_leaf_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.796.3GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.696.2GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.395.8GSM334224Populus balsamifera_1006_mature_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.894.9GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.794.7GSM372095Clone3200_LPI5_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
3.293.5GSM372093Clone3200_LPI5_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.992.5GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.992.5GSM362883Clone1979_LPI2_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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