| Gene ID | PtpAffx.212850.1.S1_at |
| Gene name | lysine/histidine transporter |
| Homology with Arabidopsis | Similar to At5g40780: LHT1 (HF=9e-28) |
| Module size | 6 genes |
| NF | 0.04 |
| %ile | 8.7 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.91 | 99.2 | 0.86 | PtpAffx.212850.1.S1_at | pmrna25146 | lysine/histidine transporter | - | 9e-28 | At5g40780 | LHT1 | O.I. | H.G. | S.X. | |
| 0.21 | 36.5 | 0.86 | PtpAffx.207501.1.S1_at | pmrna14897 | glycosyltransferase | - | 1e-39 | At3g25140 | QUA1 (QUASIMODO 1) | O.I. | H.G. | S.X. | |
| 0.07 | 11.6 | 0.89 | PtpAffx.1172.2.A1_at | CV232336 | - | - | 1e+0 | At1g48780 | unknown protein | O.I. | H.G. | S.X. | |
| 0.04 | 6.9 | 0.89 | PtpAffx.214837.1.S1_at | pmrna28728 | white-brown-complex ABC transporter family | - | 4e-3 | At4g27420 | ABC transporter family protein | O.I. | H.G. | S.X. | |
| 0.02 | 3.6 | 0.87 | PtpAffx.61161.1.A1_at | CV240842 | hypothetical protein | - | 5e+0 | At5g22190 | unknown protein | O.I. | H.G. | S.X. | |
| 0.02 | 3.6 | 0.86 | PtpAffx.154543.1.A1_a_at | CV268890 | - | - | 5e-24 | At4g34490 | ATCAP1 (ARABIDOPSIS THALIANA CYCLASE ASSOCIATED PROTEIN 1) | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 5.4 | 97.0 | GSM327658 | Populus balsamifera_Female_Catkin_midday_3 | GSE13990 | Populus balsamifera developmental tissue series | |
| 4.9 | 96.5 | GSM327656 | Populus balsamifera_Female_Catkin_midday_1 | GSE13990 | Populus balsamifera developmental tissue series | |
| 4.5 | 96.1 | GSM327659 | Populus balsamifera_Male_Catkin_midday_1 | GSE13990 | Populus balsamifera developmental tissue series | |
| 2.9 | 92.5 | GSM136938 | Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucrose | GSE5887 | Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere | |
| 2.6 | 91.3 | GSM327661 | Populus balsamifera_Male_Catkin_midday_3 | GSE13990 | Populus balsamifera developmental tissue series | |
| 2.4 | 90.4 | GSM372096 | Clone3200_LPI5_N-_4w_rep2 | GSE14893 | Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200 | |
| 2.2 | 89.3 | GSM327657 | Populus balsamifera_Female_Catkin_midday_2 | GSE13990 | Populus balsamifera developmental tissue series | |
| 2.0 | 88.0 | GSM362885 | Clone1979_LPI2_N-_4w_rep1 | GSE14515 | Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979 | |
| 1.9 | 87.2 | GSM372089 | Clone3200_LPI2_N+_4w_rep1 | GSE14893 | Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200 | |
| 1.8 | 86.4 | GSM372095 | Clone3200_LPI5_N-_4w_rep1 | GSE14893 | Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200 | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.61 | 81.2 | Os08g0127100 | At5g40780 | - | Lysine and histidine specific transporter | 3e-19 | At5g40780 | LHT1 | O.I. | H.G. | S.X. | |
| 0.77 | 93.1 | Os04g0503600 | At5g40780 | - | Protein kinase domain containing protein | 2e+0 | At5g58940 | CRCK1 (CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 1) | O.I. | H.G. | S.X. | |
| 0.60 | 79.7 | Os11g0703400 | At5g40780 | - | Snf7 family protein | 2e-19 | At2g06530 | VPS2.1 | O.I. | H.G. | S.X. | |
| 0.53 | 71.3 | Os04g0451900 | At5g40780 | - | Protein phosphatase 2C-like domain containingprotein | 6e-11 | At1g22280 | protein phosphatase 2C, putative / PP2C, putative | O.I. | H.G. | S.X. | |
| 0.50 | 68.0 | Os02g0475300 | At5g40780 | - | Membrane attack complexcomponent/perforin/complement C9 family protein | 5e+0 | At5g08590 | SNRK2.1 (SNF1-RELATED PROTEIN KINASE 2.1) | O.I. | H.G. | S.X. | |
| 0.44 | 58.1 | Os02g0173800 | At5g40780 | - | Eukaryotic protein of unknown function DUF284family protein | 2e-8 | At1g16360 | LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein | O.I. | H.G. | S.X. | |
| 0.22 | 19.4 | Os01g0959800 | At5g40780 | - | Phosphatidylserine decarboxylase | 1e-9 | At4g25970 | PSD3 (phosphatidylserine decarboxylase 3) | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Triticum_aestivum |
| Vitis_vinifera |
| Zea_mays |
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