Co-expression analysis

Gene ID	PtpAffx.212372.1.S1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At1g72000: beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative (HF=3e-25)
Module size	7 genes
NF	0.52
%ile	82.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	91.1	0.92	PtpAffx.212372.1.S1_at	pmrna24246	hypothetical protein	-	3e-25	At1g72000	beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.63	88.1	0.92	Ptp.605.1.A1_at	CK089297	-	-	2e+0	At5g54150	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.55	82.2	0.93	PtpAffx.28955.1.S1_at	BU868770	hypothetical protein	-	4e-13	At2g36310	URH1 (URIDINE-RIBOHYDROLASE 1)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.46	73.7	0.94	PtpAffx.221308.1.S1_at	pmrna38101	hypothetical protein	-	1e-21	At1g72000	beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.38	63.7	0.93	PtpAffx.156340.1.S1_at	CX657667	hypothetical protein	-	1e+0	At2g26520	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.36	61.6	0.95	PtpAffx.10087.1.A1_at	CV259549	hypothetical protein	-	1e-13	At2g36310	URH1 (URIDINE-RIBOHYDROLASE 1)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.29	50.5	0.94	PtpAffx.55786.1.S1_s_at	CA825382	hypothetical protein	-	5e-35	At4g09510	beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.3	98.5	GSM136936	Poplar in 1 x hrp + 0.25 % sucrose no bacteria	GSE5887	Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
4.4	95.9	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
3.6	94.5	GSM327657	Populus balsamifera_Female_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
3.0	92.9	GSM327659	Populus balsamifera_Male_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.9	92.5	GSM327660	Populus balsamifera_Male_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.8	92.1	GSM136938	Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucrose	GSE5887	Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphere
2.7	91.8	GSM327658	Populus balsamifera_Female_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.6	91.3	GSM327412	Populus balsamifera_1006_differentiating_xylem_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.3	89.8	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.1	88.6	GSM327413	Populus balsamifera_1006_differentiating_xylem_midday_3	GSE13990	Populus balsamifera developmental tissue series

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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