Co-expression analysis

Gene ID	PtpAffx.211901.1.S1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At3g07880: Rho GDP-dissociation inhibitor family protein (HF=8e-42)
Module size	8 genes
NF	0.73
%ile	97.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.64	88.4	0.96	PtpAffx.211901.1.S1_at	pmrna23382	hypothetical protein	-	8e-42	At3g07880	Rho GDP-dissociation inhibitor family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.93	99.5	0.98	PtpAffx.204647.1.S1_at	pmrna9138	hypothetical protein	-	6e-27	At2g15880	leucine-rich repeat family protein / extensin family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.88	97.7	0.97	PtpAffx.207862.1.S1_at	pmrna15609	hypothetical protein	-	2e-10	At1g69540	AGL94 (AGAMOUS-LIKE 94)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.75	94.1	0.98	PtpAffx.204237.1.S1_at	pmrna8331	hypothetical protein	-	4e-28	At2g21480	protein kinase family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.71	92.6	0.98	PtpAffx.202130.1.S1_at	pmrna4255	hypothetical protein	-	1e-41	At5g43330	malate dehydrogenase, cytosolic, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.67	91.1	0.98	PtpAffx.12078.1.A1_at	CV241533	hypothetical protein	-	4e-4	At4g17490	ATERF6 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 6)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.55	82.2	0.99	PtpAffx.209162.1.S1_at	pmrna18135	hypothetical protein	-	9e-15	At2g03060	DNA binding / transcription factor	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.42	68.6	0.99	PtpAffx.214342.1.S1_at	pmrna27891	hypothetical protein	-	2e-22	At3g24620	ROPGEF8	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.7	97.9	GSM328062	Populus x canescens leaf control_rep_02	GSE13109	Effect of hypoxia on gene expression in Grey poplar
5.0	96.6	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
4.8	96.4	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
3.5	94.3	GSM327659	Populus balsamifera_Male_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.7	91.8	GSM327658	Populus balsamifera_Female_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.4	90.4	GSM327409	Populus balsamifera_1006_root_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.3	89.8	GSM327657	Populus balsamifera_Female_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.2	89.3	GSM327660	Populus balsamifera_Male_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.1	88.6	GSM327407	Populus balsamifera_1006_root_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.0	88.0	GSM327656	Populus balsamifera_Female_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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