Co-expression analysis

Gene ID PtpAffx.21139.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At1g07400: 17.8 kDa class I heat shock protein (HSP17.8-CI) (HF=2e-15)
Module size 6 genes
NF 0.29
%ile 51.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8096.00.91PtpAffx.21139.1.S1_atBU889382hypothetical protein-2e-15At1g0740017.8 kDa class I heat shock protein (HSP17.8-CI)O.I.H.G.S.X.
0.5078.60.96PtpAffx.57928.2.S1_atBI120751hypothetical protein-1e+0At3g52990pyruvate kinase, putativeO.I.H.G.S.X.
0.4067.00.94PtpAffx.111871.2.S1_atCX170955hypothetical protein-5e+0Atmg01250-O.I.H.G.S.X.
0.2950.50.94PtpAffx.82253.1.A1_atCV232973hypothetical protein-2e-20At3g52990pyruvate kinase, putativeO.I.H.G.S.X.
0.2340.50.91Ptp.1501.1.A1_s_atCK093594hypothetical protein-4e-23At2g18190AAA-type ATPase family proteinO.I.H.G.S.X.
0.1423.50.91PtpAffx.114748.1.A1_atCV245313hypothetical protein-3e-14At5g42720glycosyl hydrolase family 17 proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.598.3GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
5.096.6GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.293.5GSM328533Populus x canescens root hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.193.2GSM328532Populus x canescens root hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.892.1GSM327281Populus balsamifera_20071015_Seedling_continuous_light_6d_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.791.8GSM328484Populus x canescens root hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.590.9GSM327359Populus balsamifera_20071015_Seedling_continuous_light_6d_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.490.4GSM327400Populus balsamifera_20071015_Etiolated_seedling_6d_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM327358Populus balsamifera_20071015_Seedling_continuous_light_6d_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.088.0GSM372100Clone3200_LPI5_N+_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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