Co-expression analysis

Gene ID PtpAffx.211365.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At4g01895: systemic acquired resistance (SAR) regulator protein NIMIN-1-related (HF=8e-5)
Module size 15 genes
NF 0.30
%ile 53.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8397.00.92PtpAffx.211365.1.S1_atpmrna22277hypothetical protein-8e-5At4g01895systemic acquired resistance (SAR) regulator protein NIMIN-1-relatedO.I.H.G.S.X.
0.4471.90.94PtpAffx.6163.1.S1_atAJ778035hypothetical protein-1e-86At3g19820DWF1 (DWARF 1)O.I.H.G.S.X.
0.4268.60.93Ptp.4266.1.S1_atBU835509--2e-11At1g02970WEE1 (ARABIDOPSIS WEE1 KINASE HOMOLOG)O.I.H.G.S.X.
0.4067.00.92PtpAffx.123129.1.A1_s_atCK091171--3e-2At4g38660thaumatin, putativeO.I.H.G.S.X.
0.4067.00.93PtpAffx.13609.1.S1_atCX167472hypothetical protein-2e-11At1g30440phototropic-responsive NPH3 family proteinO.I.H.G.S.X.
0.3762.30.93Ptp.7158.1.S1_s_atCV246958--8e+0At5g64310AGP1 (ARABINOGALACTAN PROTEIN 1)O.I.H.G.S.X.
0.3661.60.96PtpAffx.106138.1.S1_atBU889364--2e+0At4g17585unknown proteinO.I.H.G.S.X.
0.2850.50.95Ptp.2544.1.A1_atCK087698hypothetical protein-1e-12At3g24660TMKL1 (transmembrane kinase-like 1)O.I.H.G.S.X.
0.2747.10.95PtpAffx.144008.1.S1_atBU833721hypothetical protein-5e-33At1g30440phototropic-responsive NPH3 family proteinO.I.H.G.S.X.
0.2747.10.95PtpAffx.9868.1.S1_atDN486485hypothetical protein-3e-3At3g16565ATP binding / alanine-tRNA ligase/ nucleic acid binding / nucleotide bindingO.I.H.G.S.X.
0.2441.80.92PtpAffx.2045.1.S1_atCK093245hypothetical protein-5e-20At1g08560SYP111 (SYNTAXIN OF PLANTS 111)O.I.H.G.S.X.
0.1932.70.95Ptp.2088.1.S1_atBI126758hypothetical protein-2e-89At1g54340ICDH (ISOCITRATE DEHYDROGENASE)O.I.H.G.S.X.
0.1729.10.95PtpAffx.35552.1.A1_atDN485907hypothetical protein-3e+0At1g61090unknown proteinO.I.H.G.S.X.
0.1525.30.94Ptp.2358.1.S1_atCV230841hypothetical protein-4e-107At1g74030enolase, putativeO.I.H.G.S.X.
0.1321.60.93PtpAffx.7321.1.S1_atCV275702hypothetical protein-2e-10At2g42710ribosomal protein L1 family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.894.9GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.494.0GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.892.1GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.590.9GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.490.4GSM328534Populus x canescens root control_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.389.8GSM328284Populus x canescens root control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.289.3GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.289.3GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.188.6GSM328292Populus x canescens root control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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