Co-expression analysis

Gene ID PtpAffx.211158.1.S1_s_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At5g22140: pyridine nucleotide-disulphide oxidoreductase family protein (HF=3e+0)
Module size 6 genes
NF 0.03
%ile 7.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4875.40.74PtpAffx.211158.1.S1_s_atpmrna21935hypothetical protein-3e+0At5g22140pyridine nucleotide-disulphide oxidoreductase family proteinO.I.H.G.S.X.
0.4471.90.79PtpAffx.21642.1.S1_x_atAJ490333.1nls-tir-nbs-lrr resistance protein /// hypothetical protein /// hypothetical protein /// hypothetical protein /// hypothetical protein-5e-3At5g11250disease resistance protein (TIR-NBS-LRR class), putativeO.I.H.G.S.X.
0.0914.60.76PtpAffx.214115.1.S1_atpmrna27476hypothetical protein-1e+0At5g55620unknown proteinO.I.H.G.S.X.
0.035.20.74PtpAffx.206457.1.S1_atpmrna12809f-box family protein-5e-4At1g55310SR33O.I.H.G.S.X.
0.012.20.75PtpAffx.222616.1.S1_atpmrna40154hypothetical protein-1e+0At3g14770nodulin MtN3 family proteinO.I.H.G.S.X.
0.012.20.74PtpAffx.223302.1.S1_x_atpmrna41227hypothetical protein-2e-1At1g62935unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.998.0GSM362887Clone1979_LPI5_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.590.9GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.590.9GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM372090Clone3200_LPI2_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.289.3GSM334224Populus balsamifera_1006_mature_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.188.6GSM327402Populus balsamifera_20071015_Etiolated_seedling_6d_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.088.0GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.088.0GSM362883Clone1979_LPI2_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.088.0GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.987.2GSM362884Clone1979_LPI2_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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