Co-expression analysis

Gene ID PtpAffx.211107.1.S1_x_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At2g31620: receptor-like protein kinase-related (HF=2e+0)
Module size 6 genes
NF 0.12
%ile 23.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7393.60.90PtpAffx.211107.1.S1_x_atpmrna21820hypothetical protein-2e+0At2g31620receptor-like protein kinase-relatedO.I.H.G.S.X.
0.4369.70.90PtpAffx.223043.1.S1_atpmrna40832--2e-4At1g32970subtilase family proteinO.I.H.G.S.X.
0.2950.50.90PtpAffx.215389.1.S1_atpmrna29548hypothetical protein-8e+0At3g06100NIP7O.I.H.G.S.X.
0.1830.80.90PtpAffx.217331.1.S1_atpmrna32547hypothetical protein-1e+0At1g05290transcription factorO.I.H.G.S.X.
0.1219.60.90PtpAffx.213729.1.S1_atpmrna26794hypothetical protein-5e+0At4g29033-O.I.H.G.S.X.
0.046.90.90PtpAffx.210427.1.S1_atpmrna20477hypothetical protein-1e+0At3g05710SYP43 (SYNTAXIN OF PLANTS 43)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.296.8GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.896.4GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.995.1GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.894.9GSM372089Clone3200_LPI2_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
3.193.2GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.590.9GSM327281Populus balsamifera_20071015_Seedling_continuous_light_6d_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM362889Clone1979_LPI5_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.389.8GSM372095Clone3200_LPI5_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage