Co-expression analysis

Gene ID	PtpAffx.210959.1.S1_x_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At1g54570: esterase/lipase/thioesterase family protein (HF=8e-23)
Module size	6 genes
NF	0.72
%ile	96.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	94.9	0.95	PtpAffx.210959.1.S1_x_at	pmrna21534	hypothetical protein	-	8e-23	At1g54570	esterase/lipase/thioesterase family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.91	99.2	0.93	PtpAffx.206187.1.S1_at	pmrna12284	hypothetical protein	-	6e-8	At5g57180	CIA2 (CHLOROPLAST IMPORT APPARATUS 2)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.83	97.0	0.93	PtpAffx.94576.1.A1_a_at	CV282515	hypothetical protein	-	4e-1	At4g08320	tetratricopeptide repeat (TPR)-containing protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.63	88.1	0.93	PtpAffx.210228.1.S1_at	pmrna20141	hypothetical protein	-	1e-8	At5g24120	SIGE (SIGMA FACTOR E)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.56	83.9	0.93	PtpAffx.210590.1.S1_s_at	pmrna20766	hypothetical protein	-	2e-8	At5g50160	FRO8 (FERRIC REDUCTION OXIDASE 8)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.47	74.6	0.94	PtpAffx.22209.1.S1_at	CK094003	-	-	8e+0	At5g20165	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.9	98.0	GSM362888	Clone1979_LPI5_N+_4w_rep2	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
6.5	97.8	GSM372093	Clone3200_LPI5_N+_4w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
5.4	97.0	GSM372044	Clone1979_LPI5_N+_8w_rep1	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
3.4	94.0	GSM372097	Clone3200_LPI5_N-_8w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.2	93.5	GSM372098	Clone3200_LPI5_N-_8w_rep2	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.0	92.9	GSM372042	Clone1979_LPI5_N-_8w_rep1	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.8	92.1	GSM372045	Clone1979_LPI5_N+_8w_rep2	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.5	90.9	GSM372096	Clone3200_LPI5_N-_4w_rep2	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.3	89.8	GSM327412	Populus balsamifera_1006_differentiating_xylem_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.3	89.8	GSM372043	Clone1979_LPI5_N-_8w_rep2	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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