Co-expression analysis

Gene ID PtpAffx.210755.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At4g00750: dehydration-responsive family protein (HF=1e-18)
Module size 8 genes
NF 0.20
%ile 37.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5078.60.88PtpAffx.210755.1.S1_atpmrna21101hypothetical protein-1e-18At4g00750dehydration-responsive family proteinO.I.H.G.S.X.
0.6791.10.87PtpAffx.204099.1.S1_atpmrna8089hypothetical protein-1e-2At2g28850CYP710A3 (cytochrome P450, family 710, subfamily A, polypeptide 3)O.I.H.G.S.X.
0.5078.60.87PtpAffx.62567.1.A1_atCV274603hypothetical protein-4e-1At1g15720TRFL5 (TRF-LIKE 5)O.I.H.G.S.X.
0.2034.60.86PtpAffx.205823.1.S1_atpmrna11519hypothetical protein-2e-3At1g75717unknown proteinO.I.H.G.S.X.
0.1932.70.86PtpAffx.49642.1.A1_atCV276412--9e-1At1g69320CLE10 (CLAVATA3/ESR-RELATED 10)O.I.H.G.S.X.
0.1423.50.86PtpAffx.202371.1.S1_s_atpmrna4762multidrug resistance protein ABC transporter family protein-1e+0At5g60142DNA bindingO.I.H.G.S.X.
0.1219.60.88PtpAffx.200363.1.S1_atpmrna725hypothetical protein-2e-8At5g24270SOS3 (SALT OVERLY SENSITIVE 3)O.I.H.G.S.X.
0.1118.10.86PtpAffx.206847.1.S1_atpmrna13596hypothetical protein-2e-10At5g25050integral membrane transporter family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.297.6GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.495.9GSM328533Populus x canescens root hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
4.295.6GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.894.9GSM328484Populus x canescens root hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.293.5GSM362889Clone1979_LPI5_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
3.293.5GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.092.9GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.892.1GSM362884Clone1979_LPI2_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.490.4GSM328557Populus x canescens root control_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.490.4GSM328534Populus x canescens root control_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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