Co-expression analysis

Gene ID	PtpAffx.210754.1.S1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At2g19050: GDSL-motif lipase/hydrolase family protein (HF=4e-1)
Module size	20 genes
NF	0.33
%ile	58.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.66	88.7	0.88	PtpAffx.210754.1.S1_at	pmrna21099	hypothetical protein	-	4e-1	At2g19050	GDSL-motif lipase/hydrolase family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.48	75.4	0.92	PtpAffx.213352.1.S1_at	pmrna26127	hypothetical protein	-	1e+0	At2g22510	hydroxyproline-rich glycoprotein family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.45	72.3	0.93	PtpAffx.213353.1.S1_at	pmrna26128	hypothetical protein	-	1e-2	At1g60630	leucine-rich repeat family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.44	71.9	0.91	Ptp.4669.1.S1_at	CK088332	-	-	8e-13	At3g53190	pectate lyase family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.44	71.9	0.92	PtpAffx.115155.2.S1_a_at	BU826541	hypothetical protein	-	2e-8	At4g23500	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.38	63.7	0.93	PtpAffx.103933.1.S1_at	CF233210	hypothetical protein	-	1e+0	At1g52900	disease resistance protein (TIR class), putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.37	62.3	0.92	PtpAffx.5430.5.S1_at	CF230074	-	-	5e-1	At1g30080	glycosyl hydrolase family 17 protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.37	62.3	0.89	Ptp.3694.1.S1_at	DN501465	hypothetical protein	-	6e-7	At1g68850	peroxidase, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.34	58.3	0.91	PtpAffx.218388.1.S1_s_at	pmrna33983	hypothetical protein	-	2e+0	At1g53610	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.33	57.5	0.91	PtpAffx.73634.1.S1_s_at	DN502654	hypothetical protein	-	6e-55	At2g47500	ATP binding / microtubule motor	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.32	55.2	0.91	PtpAffx.221283.1.S1_at	pmrna38056	hypothetical protein	-	1e-5	At1g71870	MATE efflux family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.31	53.7	0.93	PtpAffx.218611.1.S1_at	pmrna34291	hypothetical protein	-	3e-1	At5g51100	FSD2 (FE SUPEROXIDE DISMUTASE 2)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.31	53.7	0.94	PtpAffx.201250.1.S1_s_at	pmrna2478	hypothetical protein	-	1e-1	At4g32330	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.29	50.5	0.93	PtpAffx.151912.1.A1_at	BP931625	hypothetical protein	-	2e-2	At3g20015	aspartic-type endopeptidase	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.27	47.1	0.91	Ptp.2707.1.S1_at	BU826219	hypothetical protein	-	1e-1	At1g78520	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.25	43.6	0.91	Ptp.2693.1.A1_at	CV231334	hypothetical protein	-	9e-8	At3g20015	aspartic-type endopeptidase	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.25	43.6	0.91	PtpAffx.215394.1.S1_s_at	pmrna29554	hypothetical protein	-	8e+0	At5g60800	heavy-metal-associated domain-containing protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.23	40.5	0.91	PtpAffx.16306.1.S1_at	DN497208	cytochrome P450	-	3e-1	At3g26320	CYP71B36	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.22	38.3	0.90	PtpAffx.1802.2.S1_at	CV225660	hypothetical protein	-	1e-42	At1g46264	AT-HSFB4	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.21	36.5	0.92	PtpAffx.92908.1.S1_at	CK097943	AP2 domain-containing transcription factor	-	2e-9	At4g37750	ANT (AINTEGUMENTA)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.9	92.5	GSM328534	Populus x canescens root control_rep_07	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.9	92.5	GSM328560	Populus x canescens root control_rep_11	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.5	90.9	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.5	90.9	GSM328558	Populus x canescens root control_rep_09	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.4	90.4	GSM328292	Populus x canescens root control_rep_05	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.4	90.4	GSM327658	Populus balsamifera_Female_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.2	89.3	GSM328285	Populus x canescens root control_rep_04	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.2	89.3	GSM328561	Populus x canescens root control_rep_12	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.2	89.3	GSM328557	Populus x canescens root control_rep_08	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.2	89.3	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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