Co-expression analysis

Gene ID PtpAffx.210644.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At3g48520: CYP94B3 (HF=5e-8)
Module size 20 genes
NF 0.27
%ile 48.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.20.83PtpAffx.210644.1.S1_atpmrna20878hypothetical protein-5e-8At3g48520CYP94B3O.I.H.G.S.X.
0.4875.40.92PtpAffx.211759.1.S1_x_atpmrna23048hypothetical protein-4e-114At2g47650UXS4 (UDP-XYLOSE SYNTHASE 4)O.I.H.G.S.X.
0.4167.70.92Ptp.2207.1.S1_atBU833892hypothetical protein-6e-18At1g15120ubiquinol-cytochrome C reductase complex 7.8 kDa protein, putative / mitochondrial hinge protein, putativeO.I.H.G.S.X.
0.3357.50.91Ptp.6495.1.S1_s_atBU897639hypothetical protein-9e-17At5g13430ubiquinol-cytochrome C reductase iron-sulfur subunit, mitochondrial, putative / Rieske iron-sulfur protein, putativeO.I.H.G.S.X.
0.3153.70.95PtpAffx.54064.1.S1_s_atBI131020hypothetical protein-3e-71At1g14830ADL1C (ARABIDOPSIS DYNAMIN-LIKE PROTEIN 1C)O.I.H.G.S.X.
0.3052.00.85PtpAffx.131798.1.S1_atDN501875hypothetical protein-5e+0At5g23920unknown proteinO.I.H.G.S.X.
0.2950.50.93PtpAffx.11524.3.S1_atCV272635hypothetical protein-4e-28At5g23250succinyl-CoA ligase (GDP-forming) alpha-chain, mitochondrial, putative / succinyl-CoA synthetase, alpha chain, putative / SCS-alpha, putativeO.I.H.G.S.X.
0.2747.10.86PtpAffx.18039.1.A1_atCV263969--1e-3At2g47060serine/threonine protein kinase, putativeO.I.H.G.S.X.
0.2340.50.93PtpAffx.41585.1.S1_atCX660062precursor of transferase serine hydroxymethyltransferase 3-0At5g26780SHM2 (SERINE HYDROXYMETHYLTRANSFERASE 2)O.I.H.G.S.X.
0.2340.50.94PtpAffx.210790.1.S1_s_atpmrna21170hypothetical protein-4e-27At4g25360-O.I.H.G.S.X.
0.2340.50.90PtpAffx.36788.2.S1_atCK106901hypothetical protein-1e-6At4g36450ATMPK14 (Mitogen-activated protein kinase 14)O.I.H.G.S.X.
0.2238.30.92Ptp.5598.1.S1_s_atDN484758hypothetical protein-2e+0At5g23535KOW domain-containing proteinO.I.H.G.S.X.
0.2136.50.93PtpAffx.111048.1.S1_atBU883776hypothetical protein-2e-94At2g22480PFK5 (PHOSPHOFRUCTOKINASE 5)O.I.H.G.S.X.
0.2034.60.92Ptp.2126.1.S1_atCN550190hypothetical protein-2e-55At1g22840CYTC-1 (CYTOCHROME C-1)O.I.H.G.S.X.
0.2034.60.94Ptp.2518.1.S1_atCV274235hypothetical protein-1e-58At3g52930fructose-bisphosphate aldolase, putativeO.I.H.G.S.X.
0.2034.60.92PtpAffx.450.5.A1_atCV278124hypothetical protein-2e-56At5g50850MAB1 (MACCI-BOU)O.I.H.G.S.X.
0.1830.80.92Ptp.2126.1.S1_x_atCN550190hypothetical protein-2e-55At1g22840CYTC-1 (CYTOCHROME C-1)O.I.H.G.S.X.
0.1626.90.91PtpAffx.13846.1.S1_atCV230669hypothetical protein-1e-48At1g63000NRS/ER (NUCLEOTIDE-RHAMNOSE SYNTHASE/EPIMERASE-REDUCTASE)O.I.H.G.S.X.
0.1321.60.92PtpAffx.119838.1.S1_a_atBU809362hypothetical protein-4e-1At1g75190unknown proteinO.I.H.G.S.X.
0.1219.60.94PtpAffx.55786.1.S1_s_atCA825382hypothetical protein-5e-35At4g09510beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.295.6GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.794.7GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.494.0GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphereLink to GEO
2.992.5GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.892.1GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.490.4GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.490.4GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.987.2GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.886.4GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.886.4GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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