Co-expression analysis

Gene ID PtpAffx.210556.1.S1_s_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At3g04630: WDL1 (HF=5e-1)
Module size 10 genes
NF 0.36
%ile 62.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6086.00.94PtpAffx.210556.1.S1_s_atpmrna20710hypothetical protein-5e-1At3g04630WDL1O.I.H.G.S.X.
0.5683.90.96PtpAffx.123000.1.S1_atCK096230hypothetical protein-2e-43At1g36310methyltransferaseO.I.H.G.S.X.
0.4369.70.96PtpAffx.20445.1.A1_s_atCF233654magnesium transporter-1e-47At1g16010magnesium transporter CorA-like family protein (MRS2-1)O.I.H.G.S.X.
0.4268.60.95PtpAffx.212672.1.S1_atpmrna24789hypothetical protein-5e-12At1g48760delta-ADR (delta-adaptin)O.I.H.G.S.X.
0.4067.00.96PtpAffx.215528.1.S1_atpmrna29780hypothetical protein-3e-52At1g28420HB-1 (homeobox-1)O.I.H.G.S.X.
0.2850.50.96PtpAffx.139103.2.S1_s_atAJ777122hypothetical protein-5e+0At4g14380unknown proteinO.I.H.G.S.X.
0.2747.10.96PtpAffx.72123.1.S1_s_atBU879670hypothetical protein-4e-1At1g33960AIG1 (AVRRPT2-INDUCED GENE 1)O.I.H.G.S.X.
0.2747.10.96PtpAffx.205203.1.S1_atpmrna10311hypothetical protein-1e-50At2g22120protein binding / zinc ion bindingO.I.H.G.S.X.
0.2441.80.96PtpAffx.132995.1.S1_atCV278938hypothetical protein-4e-71At2g30880pleckstrin homology (PH) domain-containing proteinO.I.H.G.S.X.
0.2238.30.96PtpAffx.119791.1.S1_s_atCX656015hypothetical protein-2e-18At1g06900catalytic/ metal ion binding / metalloendopeptidase/ zinc ion bindingO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.997.4GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.495.9GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.494.0GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.892.1GSM334226Populus balsamifera_1006_mature_leaf_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.791.8GSM327403Populus balsamifera_20071015_Etiolated_seedling_6d_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM362888Clone1979_LPI5_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.289.3GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.188.6GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.088.0GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphereLink to GEO
1.886.4GSM327397Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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