Co-expression analysis

Gene ID PtpAffx.210274.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At3g49200: unknown protein (HF=3e-12)
Module size 6 genes
NF 0.43
%ile 71.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5078.60.95PtpAffx.210274.1.S1_atpmrna20208hypothetical protein-3e-12At3g49200unknown proteinO.I.H.G.S.X.
0.6187.00.95PtpAffx.60647.1.S1_atCV266317hypothetical protein-3e-55At1g58440XF1O.I.H.G.S.X.
0.5784.20.95PtpAffx.214507.1.S1_atpmrna28213hypothetical protein-4e-47At2g12646-O.I.H.G.S.X.
0.3255.20.95PtpAffx.203194.1.S1_s_atpmrna6331hypothetical protein-3e-5At2g45430DNA-binding protein-relatedO.I.H.G.S.X.
0.3255.20.95PtpAffx.54796.1.S1_atDN497368aminophospholipid ATPase /// aminophospholipid ATPase-3e-1At1g47970unknown proteinO.I.H.G.S.X.
0.3255.20.95PtpAffx.9749.1.A1_atDN491489hypothetical protein-4e+0At5g04790unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.996.5GSM244440Mixed infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungiLink to GEO
4.696.2GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.995.1GSM362888Clone1979_LPI5_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
3.193.2GSM372096Clone3200_LPI5_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
3.092.9GSM372095Clone3200_LPI5_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.590.9GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.490.4GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.188.6GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.088.0GSM244441Mixed infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungiLink to GEO
2.088.0GSM362887Clone1979_LPI5_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os08g0222100, orthologous to the query gene, PtpAffx.210274.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9198.9Os08g0222100At3g49200-Conserved hypothetical protein2e+0At1g02710glycine-rich proteinO.I.H.G.S.X.
0.8094.6Os05g0225800At3g49200-Szp protein9e+0At5g66815unknown proteinO.I.H.G.S.X.
0.7391.1Os10g0351700At3g49200-Tapetum specific protein (Tapetum-specificendoxylanase)6e-2At4g33840glycosyl hydrolase family 10 proteinO.I.H.G.S.X.
0.6787.2Os04g0668400At3g49200-Conserved hypothetical protein1e+0At5g15690-O.I.H.G.S.X.
0.5777.0Os03g0106500At3g49200-Beta-expansin precursor (Beta-expansin 1)3e+0At1g54860unknown proteinO.I.H.G.S.X.
0.4051.1Os05g0178100At3g49200-GA 3beta-hydroxylase2e-1At2g01080-O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Triticum_aestivum
Vitis_vinifera
Zea_mays



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