Co-expression analysis

Gene ID	PtpAffx.209695.1.S1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At1g60690: aldo/keto reductase family protein (HF=9e-7)
Module size	6 genes
NF	0.04
%ile	10.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.60	86.0	0.78	PtpAffx.209695.1.S1_at	pmrna19135	hypothetical protein	-	9e-7	At1g60690	aldo/keto reductase family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.23	40.5	0.78	PtpAffx.221697.1.S1_at	pmrna38714	hypothetical protein	-	4e-1	At4g29850	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.21	36.5	0.76	PtpAffx.211665.1.S1_at	pmrna22867	hypothetical protein	-	1e+0	At5g57181	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.11	18.1	0.79	PtpAffx.216057.1.S1_at	pmrna30617	hypothetical protein	-	4e+0	At2g21100	disease resistance-responsive protein-related / dirigent protein-related	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.07	11.6	0.77	PtpAffx.222106.1.S1_at	pmrna39325	hypothetical protein	-	3e+0	At1g77180	chromatin protein family	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.01	2.2	0.77	PtpAffx.217509.1.S1_at	pmrna32800	hypothetical protein	-	5e-1	At3g56290	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.6	97.9	GSM372096	Clone3200_LPI5_N-_4w_rep2	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
5.0	96.6	GSM327411	Populus balsamifera_1006_differentiating_xylem_midday_1	GSE13990	Populus balsamifera developmental tissue series
4.5	96.1	GSM362889	Clone1979_LPI5_N-_4w_rep1	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
3.4	94.0	GSM372095	Clone3200_LPI5_N-_4w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.3	93.7	GSM328532	Populus x canescens root hypoxia_rep_02	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.5	90.9	GSM362888	Clone1979_LPI5_N+_4w_rep2	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
2.4	90.4	GSM328563	Populus x canescens root hypoxia_rep_05	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.4	90.4	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.2	89.3	GSM328565	Populus x canescens root hypoxia_rep_07	GSE13109	Effect of hypoxia on gene expression in Grey poplar
1.9	87.2	GSM328567	Populus x canescens root hypoxia_rep_09	GSE13109	Effect of hypoxia on gene expression in Grey poplar

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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