Co-expression analysis

Gene ID PtpAffx.209285.1.S1_at
Gene name anthranilate synthase, alpha subunit 1
Homology with ArabidopsisSimilar to At5g05730: ASA1 (ANTHRANILATE SYNTHASE ALPHA SUBUNIT 1) (HF=4e-21)
Module size 11 genes
NF 0.20
%ile 36.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7493.80.88PtpAffx.209285.1.S1_atpmrna18350anthranilate synthase, alpha subunit 1-4e-21At5g05730ASA1 (ANTHRANILATE SYNTHASE ALPHA SUBUNIT 1)O.I.H.G.S.X.
0.3863.70.85PtpAffx.5388.1.A1_atCV239449--2e+0At5g36659-O.I.H.G.S.X.
0.3559.70.87PtpAffx.9269.1.S1_atCK090642hypothetical protein-4e-1At3g62580-O.I.H.G.S.X.
0.3559.70.88PtpAffx.24590.1.S1_atCX169344hypothetical protein-8e-2At5g25570unknown proteinO.I.H.G.S.X.
0.2850.50.87PtpAffx.207033.1.S1_atpmrna13939hypothetical protein-4e-14At3g18730TSK (TONSOKU)O.I.H.G.S.X.
0.2340.50.88PtpAffx.203737.1.S1_atpmrna7385hypothetical protein-4e-2At4g27240zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.1525.30.88Ptp.8020.1.A1_atCK090666--8e-45At3g27360histone H3O.I.H.G.S.X.
0.1423.50.87PtpAffx.5253.1.A1_atCV255813--2e+0At4g32105galactosyltransferaseO.I.H.G.S.X.
0.1321.60.88PtpAffx.108357.1.A1_atCV243662--3e-5At1g27360squamosa promoter-binding protein-like 11 (SPL11)O.I.H.G.S.X.
0.1118.10.88PtpAffx.94838.1.A1_atCV269234hypothetical protein-1e-3At1g73620thaumatin-like protein, putative / pathogenesis-related protein, putativeO.I.H.G.S.X.
0.0914.60.89PtpAffx.75767.1.A1_atCV258069hypothetical protein-2e-2At1g56670GDSL-motif lipase/hydrolase family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.896.4GSM328105Populus x canescens leaf hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
4.295.6GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.095.3GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.494.0GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.590.9GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM372091Clone3200_LPI2_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.289.3GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM328066Populus x canescens leaf control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.289.3GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.684.5GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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