Co-expression analysis

Gene ID	PtpAffx.209285.1.S1_at
Gene name	anthranilate synthase, alpha subunit 1
Homology with Arabidopsis	Similar to At5g05730: ASA1 (ANTHRANILATE SYNTHASE ALPHA SUBUNIT 1) (HF=4e-21)
Module size	11 genes
NF	0.20
%ile	36.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.74	93.8	0.88	PtpAffx.209285.1.S1_at	pmrna18350	anthranilate synthase, alpha subunit 1	-	4e-21	At5g05730	ASA1 (ANTHRANILATE SYNTHASE ALPHA SUBUNIT 1)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.38	63.7	0.85	PtpAffx.5388.1.A1_at	CV239449	-	-	2e+0	At5g36659	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.35	59.7	0.87	PtpAffx.9269.1.S1_at	CK090642	hypothetical protein	-	4e-1	At3g62580	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.35	59.7	0.88	PtpAffx.24590.1.S1_at	CX169344	hypothetical protein	-	8e-2	At5g25570	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.28	50.5	0.87	PtpAffx.207033.1.S1_at	pmrna13939	hypothetical protein	-	4e-14	At3g18730	TSK (TONSOKU)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.23	40.5	0.88	PtpAffx.203737.1.S1_at	pmrna7385	hypothetical protein	-	4e-2	At4g27240	zinc finger (C2H2 type) family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.15	25.3	0.88	Ptp.8020.1.A1_at	CK090666	-	-	8e-45	At3g27360	histone H3	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.14	23.5	0.87	PtpAffx.5253.1.A1_at	CV255813	-	-	2e+0	At4g32105	galactosyltransferase	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.13	21.6	0.88	PtpAffx.108357.1.A1_at	CV243662	-	-	3e-5	At1g27360	squamosa promoter-binding protein-like 11 (SPL11)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.11	18.1	0.88	PtpAffx.94838.1.A1_at	CV269234	hypothetical protein	-	1e-3	At1g73620	thaumatin-like protein, putative / pathogenesis-related protein, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.09	14.6	0.89	PtpAffx.75767.1.A1_at	CV258069	hypothetical protein	-	2e-2	At1g56670	GDSL-motif lipase/hydrolase family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.8	96.4	GSM328105	Populus x canescens leaf hypoxia_rep_01	GSE13109	Effect of hypoxia on gene expression in Grey poplar
4.2	95.6	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
4.0	95.3	GSM327409	Populus balsamifera_1006_root_midday_3	GSE13990	Populus balsamifera developmental tissue series
3.4	94.0	GSM327660	Populus balsamifera_Male_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.5	90.9	GSM327657	Populus balsamifera_Female_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.3	89.8	GSM372091	Clone3200_LPI2_N-_4w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.2	89.3	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.2	89.3	GSM328066	Populus x canescens leaf control_rep_04	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.2	89.3	GSM327407	Populus balsamifera_1006_root_midday_1	GSE13990	Populus balsamifera developmental tissue series
1.6	84.5	GSM327412	Populus balsamifera_1006_differentiating_xylem_midday_2	GSE13990	Populus balsamifera developmental tissue series

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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