Co-expression analysis

Gene ID	PtpAffx.209265.1.S1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At2g40260: myb family transcription factor (HF=1e-2)
Module size	8 genes
NF	0.04
%ile	8.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.46	73.7	0.77	PtpAffx.209265.1.S1_at	pmrna18309	hypothetical protein	-	1e-2	At2g40260	myb family transcription factor	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.31	53.7	0.86	PtpAffx.11372.1.A1_at	CV268886	hypothetical protein	-	9e-2	At3g17210	HS1 (HEAT STABLE PROTEIN 1)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.22	38.3	0.88	PtpAffx.200063.1.S1_at	pmrna116	hypothetical protein	-	4e-17	At3g12120	FAD2 (FATTY ACID DESATURASE 2)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.07	11.6	0.84	PtpAffx.103877.1.S1_at	CF236337	hypothetical protein	-	1e-1	At5g37360	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.06	9.8	0.84	PtpAffx.140744.1.A1_at	CV246726	-	-	8e-1	At5g07880	SNAP29	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.04	6.9	0.86	PtpAffx.15778.1.S1_at	CV236739	-	-	3e-17	At1g47655	Dof-type zinc finger domain-containing protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.04	6.9	0.81	PtpAffx.210101.1.S1_at	pmrna19893	auxin efflux carrier family protein	-	2e-6	At1g20925	auxin efflux carrier family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.01	2.2	0.78	PtpAffx.206882.1.S1_at	pmrna13664	hypothetical protein	-	2e+0	At4g32105	galactosyltransferase	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.6	97.2	GSM327413	Populus balsamifera_1006_differentiating_xylem_midday_3	GSE13990	Populus balsamifera developmental tissue series
4.4	95.9	GSM327660	Populus balsamifera_Male_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
3.6	94.5	GSM327412	Populus balsamifera_1006_differentiating_xylem_midday_2	GSE13990	Populus balsamifera developmental tissue series
3.1	93.2	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
3.0	92.9	GSM327411	Populus balsamifera_1006_differentiating_xylem_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.9	92.5	GSM327657	Populus balsamifera_Female_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.2	89.3	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
1.9	87.2	GSM372090	Clone3200_LPI2_N+_4w_rep2	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
1.9	87.2	GSM327659	Populus balsamifera_Male_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
1.7	85.5	GSM327409	Populus balsamifera_1006_root_midday_3	GSE13990	Populus balsamifera developmental tissue series

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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