Co-expression analysis

Gene ID	PtpAffx.2091.1.A1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At5g44060: unknown protein (HF=3e+0)
Module size	6 genes
NF	0.70
%ile	96.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.60	86.0	0.80	PtpAffx.2091.1.A1_at	CK088284	hypothetical protein	-	3e+0	At5g44060	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.80	96.0	0.84	PtpAffx.216070.1.S1_at	pmrna30631	-	-	2e-1	At5g38610	invertase/pectin methylesterase inhibitor family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.71	92.6	0.81	PtpAffx.222924.1.S1_at	pmrna40652	hypothetical protein	-	1e+1	At3g01070	plastocyanin-like domain-containing protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.67	91.1	0.81	PtpAffx.218897.1.S1_at	pmrna34642	hypothetical protein	-	1e+1	At5g22440	60S ribosomal protein L10A (RPL10aC)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.61	87.0	0.83	Ptp.1076.1.S1_at	CK093557	-	-	2e+0	At5g37670	15.7 kDa class I-related small heat shock protein-like (HSP15.7-CI)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.40	67.0	0.84	PtpAffx.202197.1.S1_at	pmrna4392	hypothetical protein	-	3e+0	At5g65165	SDH2-3	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.9	98.7	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
5.4	97.0	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
3.6	94.5	GSM362889	Clone1979_LPI5_N-_4w_rep1	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
3.4	94.0	GSM372093	Clone3200_LPI5_N+_4w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.7	91.8	GSM328062	Populus x canescens leaf control_rep_02	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.7	91.8	GSM334224	Populus balsamifera_1006_mature_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.5	90.9	GSM328066	Populus x canescens leaf control_rep_04	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.2	89.3	GSM327411	Populus balsamifera_1006_differentiating_xylem_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.1	88.6	GSM372095	Clone3200_LPI5_N-_4w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
1.9	87.2	GSM328063	Populus x canescens leaf control_rep_03	GSE13109	Effect of hypoxia on gene expression in Grey poplar

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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